| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5006 |
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| Symbol | |
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| ID | 1042945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5703852 |
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| End bp | 5704466 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637148406 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | NP_747108 |
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| Protein GI | 26991683 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCC GCGATCGTAT CCTTGAATGC GCCCTGCAGT TGTTCAACCA GCAGGGCGAA
CCCAACGTAT CCACCCTGGA AATTGCCAAC GAACTCGGCA TCAGCCCAGG CAACCTGTAC
TACCACTTCC ATGGCAAGGA GCCCTTGGTT CTGGGCTTGT TCGAGCGTTT TGAAGAAGCG
TTGATGCCGT TGCTGGACCC ACCGCTGGAG GTGCGGCTGG ACGCAGAGGA TTACTGGCTG
TTTCTGCACT TGATCGTCGA GCGCATGGCT CAGTACCGCT TCCTGTTCCA GGACCTGTCC
AACCTGACCG GGCGCCTGCC CAAACTCGCC CGAGGCATGC GCAGCCTGAT CAATGCAATC
AAACGCACGC TGGCGGCGCT GTTGGCCAGC CTCAAGAGCC AGGGGCTGGT AGAAAGTGAT
ACCCAGGCGC TGGGGCAACT GGTCGAGCAG ATCACACTGA CGCTGATGTT CTCGCTGGAT
TACCAGCGTG TGCTGGGGCG CGAGGGGGAT GTGGGGATCG TGGTGTATCA GGTGATGATG
CTGGTGGCGC CGCATCTGCA GGCCCAGGCC CGGGCGGCGG CGGAGCAGCT GGCAGTGAAG
TACCTGGAGG GGTAG
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| Protein sequence | MKTRDRILEC ALQLFNQQGE PNVSTLEIAN ELGISPGNLY YHFHGKEPLV LGLFERFEEA
LMPLLDPPLE VRLDAEDYWL FLHLIVERMA QYRFLFQDLS NLTGRLPKLA RGMRSLINAI
KRTLAALLAS LKSQGLVESD TQALGQLVEQ ITLTLMFSLD YQRVLGREGD VGIVVYQVMM
LVAPHLQAQA RAAAEQLAVK YLEG
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