Gene PP_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4997 
SymbolpyrR 
ID1042230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5693736 
End bp5694254 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID637148397 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionNP_747099 
Protein GI26991674 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAC CCAATCCCGC CGAGCTGATC CGGCAGATGG CTGTCGACCT TCGTGCCCAC 
CTGGCGCGCC GGGCAATCAC CGAGCCCCGT TACATCGGTA TCCGCACCGG CGGCGTCTGG
GTTGCCCAGG CCCTGCAGGA TGCCATGGGC GACACCAGCC CAATGGGCAC CCTGGACGTG
TCGTTCTACC GCGACGACTT CAGCCAGAAC GGCCTGCACC CACAAGTGCG CCCGTCCGAG
TTGCCGTTCG AGGTCGAAGG CCAGCACCTG GTGCTGGTGG ATGACGTGCT GATGAGCGGT
CGCACCATCC GCGCGGCGCT CAACGAACTG TTCGATTACG GCCGCCCGGC CAGCGTCACC
CTGGTCTGCC TGCTGGACCT GGATGCCGGC GAACTGCCGA TTCGCCCGAA CGTGCTCGGC
GCCACCCTGT CGCTGGGCGC CCATGAACGG GTAAAATTGA CCGGACCCGC ACCGCTCGCC
CTCGAGCGCC AGGACCTCGC CTCCGCTTCC GCCCTTTAA
 
Protein sequence
MSLPNPAELI RQMAVDLRAH LARRAITEPR YIGIRTGGVW VAQALQDAMG DTSPMGTLDV 
SFYRDDFSQN GLHPQVRPSE LPFEVEGQHL VLVDDVLMSG RTIRAALNEL FDYGRPASVT
LVCLLDLDAG ELPIRPNVLG ATLSLGAHER VKLTGPAPLA LERQDLASAS AL