| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4990 |
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| Symbol | pilI |
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| ID | 1041636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5688968 |
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| End bp | 5689522 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637148390 |
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| Product | type IV pili signal transduction protein PilI |
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| Protein accession | NP_747092 |
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| Protein GI | 26991667 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCACCC GCCCGCAAGG CGCGTCGCTG ACCGCCTTTG AGTTGCTGCT GGACATCGAC
CGGCGCTGTC GCCTGCTGGT TGCCGACCAG CCGCCGCAGG ACAACCGCGT GCAGCAGTGG
AGCGGCATTG GCTTTCGCAT TGCCGGGCAG TGGTTCGTCG CGCCCATGGG CGAAGTGGCC
GAGGTGCTGC GCGAGCCGCG CAGTAGCCGC GTTCCCGGCG TGCAGCCGTG GGTGTGCGGG
GTGGCCAACC TGCGTGGCCG GCTGTTGCCG GTGATGGACC TGAGCTGCTT CTTCGGCCTT
GGCCACGCCG CACCGGGCAA GCAGCGGCGA GTGCTGGTGC TGGATCACGA CGACCTGTTC
GTCGGTTTGC TGGTCGACGA GGTGCTGGGC CTTCAGCACT TTGCCCTCGA CAGCCTGCAG
CTGTCGCCGC CGCAGCCGCT GATCCCTGCC GCTGCACGCT TTGTGCAGGG GTATTTTCCG
CGTGAACGTA ACTGGGCGAT CTTCAGCCCC TTTGCCCTGG CCCAGGCGCC GGGCTTTCTC
GATGTGGCGT TATAG
|
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| Protein sequence | MTTRPQGASL TAFELLLDID RRCRLLVADQ PPQDNRVQQW SGIGFRIAGQ WFVAPMGEVA
EVLREPRSSR VPGVQPWVCG VANLRGRLLP VMDLSCFFGL GHAAPGKQRR VLVLDHDDLF
VGLLVDEVLG LQHFALDSLQ LSPPQPLIPA AARFVQGYFP RERNWAIFSP FALAQAPGFL
DVAL
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