| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4988 |
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| Symbol | |
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| ID | 1042467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5681943 |
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| End bp | 5686883 |
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| Gene Length | 4941 bp |
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| Protein Length | 1646 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148388 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | NP_747090 |
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| Protein GI | 26991665 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.4615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTG CCGTAAGCCC CGAGCGTCAC GAAACAGTGG CGCTGGCCTG GACCAAGGCC
GCCATCCTCG ATTGCCTGGG CCAGGCACGG CAGGCGCTGG AGCGCTTTGC CGGCGAGACG
GGAGACCTGT CGATGATGGC TTTCGTGGTC GACAACCTGC ACCAGGTGCA CGGCTGCCTG
CGCATGCTCG AACTGCGCGG CGCGACGCGC CTGGCGGAGG AGCTGGAGCT GTTTGCCAGG
GCGTTGGCCG ACGGCCAGGT CAGCCCCCGG GGTGATTGCC TGGGTGCATT GTTCCGCGGC
CTGGAGCAGT TGCCCTCGTA CCTGGAGCGG TTGCGCGGTG CTCGCCATGA CCTGCCACTG
GTGATGCTGC CGTTGCTCAA CCAGCTGCGC GCCTGCCGGG GGGAGGAACC GCTGGCTCAG
GCCAGCCTGA TGACCGGCGC CGCCCAACGC TTTGCGGGTG ACGATGACCT TGCCAACCTC
GACCTGTCGC TGGGCAACTG GCGTGACCAA CTGCAGGCCG GGTCGGGGCG CGATGCGCTG
CGTTCGGTGG TGACTGCACT GTGCGATGAC TTGATGCGCA TCAAGGAGCG CCTGGACCAG
TTCGGGCGCG GCGACCGTCA GCACCGCGAA CAGCTCGATG CGCTGTTGGC GCCGTTGCGC
CACGTGGCTG ACACCCTGGC GGTACTGGGC TTTCAGCAAC CGCGGCGGGT GATCATCGAC
CAGGTGCTGG CGTTGCAGGC ATTGGCTCAG GGCGAGCGGG CGGTGGACGA CGCGGTGTTG
ATGGATGTGG CGGGGGCTCT GTTGTACGTG GAAGCCTCCC TGAACGGCAT GGTCGGCCCT
TTGGAGGAAA ACGGCCAAGG CAGCCTGCCG GGCTCGGACC TGGCCGAGAT ACGCCAGCTG
GTGCTGAATG AATCGCTGAA CGTGTTGCAG CAGGCCAAGG ATCTGATCGG CGATTACCTG
GAGTCCGACT GGCCCCGGCA ACGCCTGCAG CCCTTGCCGG GGCTGTTGCA GCAGATCCGC
GGGGCATTGG CCATGTTGAT GCTGCCGGCC GTGGCCGAGC TGTTTGTCGG CTGCGCAAGC
TATGTGCAGC GTTGGTTGCA GCACCTGGAG GAAGAGCCGC CGATTGATGA GCTGACGCAC
TTGGCCGAGG CACTGAGCGC TGCCGAATGC TACCTGCAAT GGCGGGCGGC AGACCCGCTG
GCCGATGGCC AACCCTTTAT CGAGATGGCA CGGGCCAGCC TGGCGGCGCT GGGTGTGCAG
TGCGTGGTGG TCGGGGCCAG CCCAGACCAG GACGGCAATG GCGATGGCAT CGATGATGAG
CTTCGCCAAG TGTTCCTTGA CGAGGCGGGC GAACTGCTGC CGGAAATCGA GCGCCACTGG
CTGCGCTGGC GTGCCGACAA CCAGCAGCGC GAGGCACTGG GTGAAGTGCG TCGCGCGCTG
CATACACTCA AAGGCAGCGG CCGCATGGTC CATGCCGAGG CGGTGGCTGA ACTGGCCTGG
GGCGCCGAGC ACCTGCTGAA CCGGGTGCTC GAGGGCCGCA GCGTGCTCAG TCCGGAAGGG
GTTGTAGCGC TGCAGCAGGT GTTCGTTCAC CTGCCTGACC TGCTGGCCGA CTTTGCCGCC
GGCCAGTTGC CGCAACTGAC TGAAATCGAG CAATTGGCCG GGCATCTGCA CAGCCTGGCC
GAAAACGATG CCCCGGCGGC TGCCGGTGTC GATGGCCTCG ATCCGCAGTT GCTGGGCATT
TTTCGCAGCG AGGCGCAGGG CCATCTGGCC AGCCTTGAGG TTTATCTGCA AAGCACCGGC
GGCCACGACA CGCCGGTCAG CGATGACTTG CAGCGTGCCT TGCACACACT CAAAGGCAGT
GCCGCCATGG CCGGTGTGAT GCCGGTGGCC GAACTGGCCA CTGCCTTCGA CCGCCTGGCC
CGTGAGTACA AGGGCCATCA ACTGCCACTG CAAATGGCCG AAATGGAATG GCTGGAGGCT
GCGCGGTCGT TGTTCCATCT GGGCTTGGCG CAACTCGATA GCACGCCCCT GGCCGCCATC
CCCGGTGCCG CGGAACTGAT CGAGCAGGTT GGCCAGGCCG TGGACCGCCG CCTGGCCAGC
CTGCATGAAG ACCCGCACCA TGCCGGCCGC AGCAAGCGTG ATCCGCAGTT GGTCGCCAGC
TTCCTGGCCC ATGCCATGGA CATCCTGCTC GATGCAGAGA CGTTGTTGTC GCGCTGGCAG
CAACAGCCCG GCCAGCGTGA CGCTCTGGAT AACCTGCTCG ACCAGATGAC CACCCTGGGG
CACGCTGCGC ACCTGGCCGA CCTGTGGCAG ATGGATGACG TGTGCGAGGC GTTGCTGGAC
CTGTATGGCG CTGTGGAGGA GGGCAGCCTG CCTGCCGATG CCCGCTTCTT CAGCCAGGCG
CAGCGGGCCC ATGAAGCCTT GCTGGACATG CTGGACGAAG TGGCGGCCGG GCAGGATATT
CCACCGCGCC CGGAGCTGGT CGACCGTCTG CGCAACCTGC TGGACCAGGC CCTGGCGCCA
GATGCCACCG GCCTGGTGGG CATCGATACG GTCACACCAC TGCACCCGGA CATGGACCTA
TCCGATACCT TGGGGTTGCC ACGCCCGCCG TTGCAGCCGC AGGTGGCCGA GCCGCTTGCC
GAGGAGCCGG AAAGCCCCGG CGAAGAGCTG CTGGAAGTGT TCCTGGAAGA AAGCTCGGAC
ATCGTCGAGA GCGCCGCGGC GGCCCTGGCG CGCTGGCAGG CCGACCCGCG CAGCAGCGTC
GAGGTGGACA ACCTGATGCG CGACCTGCAC ACCCTCAAAG GCGTGGCGCG CATGGTCGAA
ATCACCCCGA TCGGCGACCT GGCCCACGAA CTGGAGTTCC TCTACGAGCT GTTGGCTGCG
GGTAGATTGC CGCCAAGTGC GCCACTGTTC GCACTGCTGC AGAACTGCCA CGACCGGCTG
GCGCATATGC TTGACGCTGT GCGTCTGGGG CAGCCGCTGC ATGCCGCTAC AGCGCTGATC
GACTACATTC GCAACTTCAG CAGTGCCGCA CTGACAGACA GTGCCGCGGG CCAGGGGCCG
CCAGAAGCTG CCACCGCCGA AATACCGGCA GCAGCGCCAG AGCGGGCACC GGGTGACATG
GTCAAGGTCG ACGCCGAGCT GCTCGACGAC CTGGGTAACC TGGCAGGCGA GCACTCGATC
ATCCGGGGGC GCATCGAGCA ACAGGTCAAC GACGCGCAGT TCGCCCTCAA CGAGATGGAG
ACCACACTCG AGCGCATGCG TGATCAGTTG CTGCGTCTGG ATGTCGAGAC CCAGGGGCGA
ATCTCCAGCC GGCAGCAGTT CGAAGGCGAT GCCTATGACG ACTTCGACCC GCTGGAAATG
GACCGCCACT CCCAGCTGCA GCAGCTGTCA CGGGCCCTCT TCGAGTCTGC CTCGGACCTG
CTCGACCTGA AGGAGACCCT GGCTCAGCGC GCTCAGGAGG CCTACAGCCT GCTGCAACAG
CAGGCGCGGG TGAACAGCCA GTTGCAGGAG GGCCTGACGG CCACCCTGAT GGTGCCGTTC
GAGCGCCTGG TGCCGCGCTT GCAGCGCGTG GTGCGGCAAG TGGCCAGCGA GCTGGGCAAG
CAGGTGGAAC TGGTGGTTGG CAATGCCGAG GGCGAACTGG ACCGCAGCGT GCTGGAACGT
ATGGTGGCGC CGCTGGAGCA TATGCTGCGC AACGCCGTTG ACCACGGCCT GGAAAGCCGC
GCAATGCGCC TGGCCGCCGG CAAGCCGGAG CAGGGCACCA TTCACCTGAA TTTGCTGCAT
GAGGGCGCCG ATATCGTCAT CGAAATGACG GATGATGGTG CCGGCGTGCC CCTGGAGGCG
GTGCGGCGCA AGGCCATCAA GCGCGGCCTG CTGGACCCGC AGGCGCAGTT GAGTGACCAC
GAGATCCTGC AGTTCATCCT GCGGCCAGGC TTTTCCACCG CCGAAAAGAT CACCCAGATT
TCCGGGCGCG GGCTGGGCAT GGATGTGGTG CACGAGGAGG TCAAGCAACT GGGTGGCTCG
ATGAGTATCG AGTCGGCGCA GGGCAAGGGG GCGCGTTTCC TGATCCGCCT GCCGTTCACC
GTGTCGATCA ACCGTGCGCT GATGGTGCAC CTGGGCGAAG AGCAATACGC CATTCCGCTC
AATACCATCG AGGGCATCGT CCGCGTGCCA CCTGCCGAGC TTGCGGCGTG CTACCAGCTG
GACTCGCCGC GCTATGTCTA TGCCGGCCAC GAATACGAGC TGCGCTACCT GGGCGAGTTG
CTGCAAGGCC TGCCGCGCCC CGCGCTGCTG GGGCAGAGCG TGCCGTTGCC GGTGCTGCTG
GTGCATTCCA AGGAGCAGTC GTTCGCCATC CAGGCCGACA GCCTGTCGCC CAGCCGCGAG
ATCGTGGTGA AAAGCCTGGG GCCGCAGTTT GCCGCGGTTG CCGGGTTATC GGGGGCGACA
CTGCTGGGCG ATGGCCGGGT GGTGCTGATT CTTGACCTGC TGGGCCAGCT GCGCGGCCAG
CAGCGACGGC TGGCCCGCTT GCCTGGTGGC GGTAGCCAAC GCCAGTTGCT TGGCCCGGCG
CCGCGCCGTG CCTTGCTGGT GATGGTGGTG GACGATTCGG TAACCGTACG CAAGGTAACC
AGCCGCCTGC TGGAGCGCCA CGGCATGAGC GTGCTTACGG CCAAGGATGG TGTAGATGCC
ATGGCCCTGC TGGAAGAGCA CCGGCCCGAC GTGTTGTTGC TGGACATCGA AATGCCGCGC
ATGGACGGCT TCGAGGTGGC CACACGCATC CGCCGTGACG CACGGCTGAA AGACTTGCCG
ATCATCATGA TCACCTCGCG TACCGGGCAG AAGCACCGGG ACCGCGCCAT GGCCATCGGC
GTCAACGAAT ACCTGGGCAA GCCGTACCAG GAATCGCTGC TGTTGCAGAG CATCGCCCAT
TGGAGCCAGG CCCATGCTTG A
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| Protein sequence | MASAVSPERH ETVALAWTKA AILDCLGQAR QALERFAGET GDLSMMAFVV DNLHQVHGCL
RMLELRGATR LAEELELFAR ALADGQVSPR GDCLGALFRG LEQLPSYLER LRGARHDLPL
VMLPLLNQLR ACRGEEPLAQ ASLMTGAAQR FAGDDDLANL DLSLGNWRDQ LQAGSGRDAL
RSVVTALCDD LMRIKERLDQ FGRGDRQHRE QLDALLAPLR HVADTLAVLG FQQPRRVIID
QVLALQALAQ GERAVDDAVL MDVAGALLYV EASLNGMVGP LEENGQGSLP GSDLAEIRQL
VLNESLNVLQ QAKDLIGDYL ESDWPRQRLQ PLPGLLQQIR GALAMLMLPA VAELFVGCAS
YVQRWLQHLE EEPPIDELTH LAEALSAAEC YLQWRAADPL ADGQPFIEMA RASLAALGVQ
CVVVGASPDQ DGNGDGIDDE LRQVFLDEAG ELLPEIERHW LRWRADNQQR EALGEVRRAL
HTLKGSGRMV HAEAVAELAW GAEHLLNRVL EGRSVLSPEG VVALQQVFVH LPDLLADFAA
GQLPQLTEIE QLAGHLHSLA ENDAPAAAGV DGLDPQLLGI FRSEAQGHLA SLEVYLQSTG
GHDTPVSDDL QRALHTLKGS AAMAGVMPVA ELATAFDRLA REYKGHQLPL QMAEMEWLEA
ARSLFHLGLA QLDSTPLAAI PGAAELIEQV GQAVDRRLAS LHEDPHHAGR SKRDPQLVAS
FLAHAMDILL DAETLLSRWQ QQPGQRDALD NLLDQMTTLG HAAHLADLWQ MDDVCEALLD
LYGAVEEGSL PADARFFSQA QRAHEALLDM LDEVAAGQDI PPRPELVDRL RNLLDQALAP
DATGLVGIDT VTPLHPDMDL SDTLGLPRPP LQPQVAEPLA EEPESPGEEL LEVFLEESSD
IVESAAAALA RWQADPRSSV EVDNLMRDLH TLKGVARMVE ITPIGDLAHE LEFLYELLAA
GRLPPSAPLF ALLQNCHDRL AHMLDAVRLG QPLHAATALI DYIRNFSSAA LTDSAAGQGP
PEAATAEIPA AAPERAPGDM VKVDAELLDD LGNLAGEHSI IRGRIEQQVN DAQFALNEME
TTLERMRDQL LRLDVETQGR ISSRQQFEGD AYDDFDPLEM DRHSQLQQLS RALFESASDL
LDLKETLAQR AQEAYSLLQQ QARVNSQLQE GLTATLMVPF ERLVPRLQRV VRQVASELGK
QVELVVGNAE GELDRSVLER MVAPLEHMLR NAVDHGLESR AMRLAAGKPE QGTIHLNLLH
EGADIVIEMT DDGAGVPLEA VRRKAIKRGL LDPQAQLSDH EILQFILRPG FSTAEKITQI
SGRGLGMDVV HEEVKQLGGS MSIESAQGKG ARFLIRLPFT VSINRALMVH LGEEQYAIPL
NTIEGIVRVP PAELAACYQL DSPRYVYAGH EYELRYLGEL LQGLPRPALL GQSVPLPVLL
VHSKEQSFAI QADSLSPSRE IVVKSLGPQF AAVAGLSGAT LLGDGRVVLI LDLLGQLRGQ
QRRLARLPGG GSQRQLLGPA PRRALLVMVV DDSVTVRKVT SRLLERHGMS VLTAKDGVDA
MALLEEHRPD VLLLDIEMPR MDGFEVATRI RRDARLKDLP IIMITSRTGQ KHRDRAMAIG
VNEYLGKPYQ ESLLLQSIAH WSQAHA
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