Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4975 |
Symbol | |
ID | 1042725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5667288 |
End bp | 5667689 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148376 |
Product | thioesterase superfamily protein |
Protein accession | NP_747078 |
Protein GI | 26991653 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.107166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTC ACACCCGCAA GTGGGTTAAA CCCGAAGACC TCAACCCCAA TGGCACCCTG TTCGGTGGCA GCCTGTTGCG CTGGATCGAT GAAGAGGCGG CGATCTACGC CATCGTCCAG CTGGGCAACC AGCGTGTGGT GACCAAGTAC ATGTCGGAAA TCAACTTCGT CAGTGCTTCG CGTCAGGGTG ACATCATCGA GCTGGGCATC ACCGCTACCG CGTTCGGCCG CACCTCGATC ACCCTCAAGT GCGAAGTGCG TAACAAGATC ACCCGCAAGA GCATTCTGAC TGTCGACAAG ATGGTGTTCG TCAACCTGGG CGAGGATGGC TTGCCGGCAG CCCATGGGCG CACCGAGATC AAGTACGTGC AGGACCAGTT CCCGGATTCG GCAGTCGAAT AG
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Protein sequence | MNFHTRKWVK PEDLNPNGTL FGGSLLRWID EEAAIYAIVQ LGNQRVVTKY MSEINFVSAS RQGDIIELGI TATAFGRTSI TLKCEVRNKI TRKSILTVDK MVFVNLGEDG LPAAHGRTEI KYVQDQFPDS AVE
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