Gene PP_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4974 
Symbol 
ID1043904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5665982 
End bp5667217 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content63% 
IMG OID637148375 
Productsodium/hydrogen exchanger 
Protein accessionNP_747077 
Protein GI26991652 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.24958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAT TAGTTGCCGC GTTTATCTGC CTCACCACAC TTCTGACCTA TGTGAACTAC 
CGCTTCATCG GCCTGCCCCC CGCTATCGGC GTGATGGTTA CGGCGCTGTT GTTTTCCCTG
ATATTGCAAG GCCTGAGCCT TGTCGGCTTC CCCGGCCTGG AAGAGCGCGT CGAAGGGCTG
ATGAACCAGA TCGACTTCAA CGATCTGCTC ATGCACTGGA TGCTGGCGTT CCTGCTGTTT
GCCGGCGCCC TGCACGTCAA CCTCAGCGAC CTGCGCAGCT ACCGCTGGCC GATCGGCCTG
CTGGCTACCT TGGGCGTGCT GATCGCCACC GTGGTCATCG GCTACCTGGC GCATTGGGTG
TTTGCCCTGT TCGGCTGGCA GGTGCCCCTG ATCTACTGCC TGCTGTTCGG TGCACTGATC
TCACCGACCG ACCCGATTGC CGTGCTTGGC GCGCTGCGTA CTGCCAATGC GCCCAAACCG
CTTAAAACCA CCATCGTCGG CGAGTCACTG TTCAACGACG GCACGGCAGT CGTGGTATTC
ACCGTGTTGC TGGGCATCAT CCAGCTGGGT GAAACACCGA GCATGGCCGA CACGGCGATC
CTGTTCGCCC GCGAGGCCAT TGGCGGTGTG GTGTTCGGTG GCCTGATCGG CTACGCCACC
TACCGCATGA TCAAGAGTGT CGAGCAGTAC CAGGTGGAGG TCATGCTGAC CCTGGCGCTG
GTAATCGGTG GTTCGGCAAT GTGCTACGAG CTGCATGTGT CGGCACCGAT CGCCATGGTG
GTGGCAGGCC TGATCATCGG CAACCTGGGG CGCAACCTGG CGATGAATGA CATGACCCGC
CGTTACATGG ACGGTTTCTG GGAGCTGATC GACGACATGC TCAATGCCCT GCTGTTCGCA
TTGATCGGCC TGGAGCTGTT GCTGCTGCCG TTCAACTGGA TGCACCTGGC GGCCGGCGGC
GTGCTGGCGC TGGCAGTGCT GCTGTCGCGC CTGTTGACGG TGGCCCCGGC GATCGTGCTG
CTGCGGCGCT GGCGCCCGGT GCCCAAAGGC ACGGTGCGGG TGCTGACCTG GGGTGGCCTG
CGCGGTGGCG TGTCGGTGGC ACTTGCACTG TCGCTACCGC TGGGCGAGGA ACGGGACCTG
CTGCTGTCGA TCACCTACAT CGTGGTGTTG TCGTCGATTC TGGTGCAGGG GTTGAGCATT
GGGCGGGTGG TGCGCAAGGT CAGCGCCCAG CCTTGA
 
Protein sequence
MLELVAAFIC LTTLLTYVNY RFIGLPPAIG VMVTALLFSL ILQGLSLVGF PGLEERVEGL 
MNQIDFNDLL MHWMLAFLLF AGALHVNLSD LRSYRWPIGL LATLGVLIAT VVIGYLAHWV
FALFGWQVPL IYCLLFGALI SPTDPIAVLG ALRTANAPKP LKTTIVGESL FNDGTAVVVF
TVLLGIIQLG ETPSMADTAI LFAREAIGGV VFGGLIGYAT YRMIKSVEQY QVEVMLTLAL
VIGGSAMCYE LHVSAPIAMV VAGLIIGNLG RNLAMNDMTR RYMDGFWELI DDMLNALLFA
LIGLELLLLP FNWMHLAAGG VLALAVLLSR LLTVAPAIVL LRRWRPVPKG TVRVLTWGGL
RGGVSVALAL SLPLGEERDL LLSITYIVVL SSILVQGLSI GRVVRKVSAQ P