Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4974 |
Symbol | |
ID | 1043904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5665982 |
End bp | 5667217 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148375 |
Product | sodium/hydrogen exchanger |
Protein accession | NP_747077 |
Protein GI | 26991652 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.24958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAT TAGTTGCCGC GTTTATCTGC CTCACCACAC TTCTGACCTA TGTGAACTAC CGCTTCATCG GCCTGCCCCC CGCTATCGGC GTGATGGTTA CGGCGCTGTT GTTTTCCCTG ATATTGCAAG GCCTGAGCCT TGTCGGCTTC CCCGGCCTGG AAGAGCGCGT CGAAGGGCTG ATGAACCAGA TCGACTTCAA CGATCTGCTC ATGCACTGGA TGCTGGCGTT CCTGCTGTTT GCCGGCGCCC TGCACGTCAA CCTCAGCGAC CTGCGCAGCT ACCGCTGGCC GATCGGCCTG CTGGCTACCT TGGGCGTGCT GATCGCCACC GTGGTCATCG GCTACCTGGC GCATTGGGTG TTTGCCCTGT TCGGCTGGCA GGTGCCCCTG ATCTACTGCC TGCTGTTCGG TGCACTGATC TCACCGACCG ACCCGATTGC CGTGCTTGGC GCGCTGCGTA CTGCCAATGC GCCCAAACCG CTTAAAACCA CCATCGTCGG CGAGTCACTG TTCAACGACG GCACGGCAGT CGTGGTATTC ACCGTGTTGC TGGGCATCAT CCAGCTGGGT GAAACACCGA GCATGGCCGA CACGGCGATC CTGTTCGCCC GCGAGGCCAT TGGCGGTGTG GTGTTCGGTG GCCTGATCGG CTACGCCACC TACCGCATGA TCAAGAGTGT CGAGCAGTAC CAGGTGGAGG TCATGCTGAC CCTGGCGCTG GTAATCGGTG GTTCGGCAAT GTGCTACGAG CTGCATGTGT CGGCACCGAT CGCCATGGTG GTGGCAGGCC TGATCATCGG CAACCTGGGG CGCAACCTGG CGATGAATGA CATGACCCGC CGTTACATGG ACGGTTTCTG GGAGCTGATC GACGACATGC TCAATGCCCT GCTGTTCGCA TTGATCGGCC TGGAGCTGTT GCTGCTGCCG TTCAACTGGA TGCACCTGGC GGCCGGCGGC GTGCTGGCGC TGGCAGTGCT GCTGTCGCGC CTGTTGACGG TGGCCCCGGC GATCGTGCTG CTGCGGCGCT GGCGCCCGGT GCCCAAAGGC ACGGTGCGGG TGCTGACCTG GGGTGGCCTG CGCGGTGGCG TGTCGGTGGC ACTTGCACTG TCGCTACCGC TGGGCGAGGA ACGGGACCTG CTGCTGTCGA TCACCTACAT CGTGGTGTTG TCGTCGATTC TGGTGCAGGG GTTGAGCATT GGGCGGGTGG TGCGCAAGGT CAGCGCCCAG CCTTGA
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Protein sequence | MLELVAAFIC LTTLLTYVNY RFIGLPPAIG VMVTALLFSL ILQGLSLVGF PGLEERVEGL MNQIDFNDLL MHWMLAFLLF AGALHVNLSD LRSYRWPIGL LATLGVLIAT VVIGYLAHWV FALFGWQVPL IYCLLFGALI SPTDPIAVLG ALRTANAPKP LKTTIVGESL FNDGTAVVVF TVLLGIIQLG ETPSMADTAI LFAREAIGGV VFGGLIGYAT YRMIKSVEQY QVEVMLTLAL VIGGSAMCYE LHVSAPIAMV VAGLIIGNLG RNLAMNDMTR RYMDGFWELI DDMLNALLFA LIGLELLLLP FNWMHLAAGG VLALAVLLSR LLTVAPAIVL LRRWRPVPKG TVRVLTWGGL RGGVSVALAL SLPLGEERDL LLSITYIVVL SSILVQGLSI GRVVRKVSAQ P
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