Gene PP_4971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4971 
Symbol 
ID1044609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5663222 
End bp5664400 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID637148372 
ProductMltA domain protein 
Protein accessionNP_747074 
Protein GI26991649 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTC ATGACAGGAA TGCACACATG AAATCTGCCC TGCGCCACCT GGCCTGGACA 
CTGCCGGTGC TGGCTTTGCT GGCCGGCTGC AACGGCGGCG AGAGCGCCAA GCCCGAGCCC
CACGCTGTCG CCACCTATGC CCCGGCCACT TGGAAAGACT TGCCGCCCGT CAGCGATGAA
GACCTGCTGG CAGGCTTTTA TGCATGGCGC AACGGCTGCG AAAAACTCAA GCGCGACCCG
GTGTGGGCGG CCACCTGCGA AGCGGCCGGC AGCGCCACAG CCAGCGCCGC CCAAGTGCGA
ACCTTCCTTG AACAGAACCT GCAGGTGTAC GGCCTGCGCT CTGCAGAGAA CAATGCCAAC
GGCCTGATTA CCGGCTACTA CGAGCCTGTC TACCCAGGCA GCCTGAGCCA ATCGGCAACC
AACCATGTGG CGGTCTACGG CATCCCTGAT GACATGATCG TGGTCGACCT GGCCAGCGTG
TACCCCGAAC TGAAGGGCAA ACGCCTGCGC GGCCGCCTGG AGGGTCGGGT GCTCAAGCCC
TACGACACGG CCGAAGTCAT CAACCGTAAC GGCGTCAAGG CACCGGTGCT GGCCTGGCTG
ACCGACCCGA TGGACCTGCA ATTCCTGCAG ATCCAGGGTT CTGGCCGGGT GCAACTGGAG
GACGGCCGTC AACTGCGCCT GGGCTACGCC GACCAGAACG GCCACCCCTA TCGGCCGATC
GGCCGCTGGC TGGTGGAGCA AGGTCAGCTG AAAAAAGAAG AAGTGAGCAT GGGCGCCATT
CATGCCTGGG CCCAGGCCAA CCCGCAGCGC GTACCAGAGC TGCTGGCCAG CAACCCCAGC
TACGTATTCT TCAGCACCCG CCCGGACAGC AACGAAGGCC CGCGCGGCTC GCTGAACGTA
CCGCTTACCG CCGGCTACAG CGTGGCCATT GACCGCAAGG TGATTCCCCT GGGCAGCTTG
TTGTGGCTGT CTACCACACG CCCGGACGGC ACGCCGGTGG TACGACCGGT TGGCGCGCAG
GACACCGGCG GGGCGATTAC CGGCGAAGTG CGTGCCGACC TGTTCTGGGG CACCGGGCCG
GAAGCAGGCG AACTGGCCGG GAACATGAAG CAGCAAGGGC AGATCTGGAT GCTGTGGCCC
AAGGGCCAGC CACTGCCTGA GGTACCCAAG GTACCTTGA
 
Protein sequence
MFAHDRNAHM KSALRHLAWT LPVLALLAGC NGGESAKPEP HAVATYAPAT WKDLPPVSDE 
DLLAGFYAWR NGCEKLKRDP VWAATCEAAG SATASAAQVR TFLEQNLQVY GLRSAENNAN
GLITGYYEPV YPGSLSQSAT NHVAVYGIPD DMIVVDLASV YPELKGKRLR GRLEGRVLKP
YDTAEVINRN GVKAPVLAWL TDPMDLQFLQ IQGSGRVQLE DGRQLRLGYA DQNGHPYRPI
GRWLVEQGQL KKEEVSMGAI HAWAQANPQR VPELLASNPS YVFFSTRPDS NEGPRGSLNV
PLTAGYSVAI DRKVIPLGSL LWLSTTRPDG TPVVRPVGAQ DTGGAITGEV RADLFWGTGP
EAGELAGNMK QQGQIWMLWP KGQPLPEVPK VP