Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4965 |
Symbol | tktA |
ID | 1041814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5655692 |
End bp | 5657689 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148366 |
Product | transketolase |
Protein accession | NP_747068 |
Protein GI | 26991643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC GTCGTGAACG TGCCAACGCC ATTCGTGCCC TCAGCATGGA TGCCGTGCAA AAGGCCAACA GCGGCCACCC AGGTGCCCCC ATGGGCATGG CGGATATCGC CGAAGTGCTT TGGCGCGACT ACCTGAAGCA CAACCCGAGC AACCCGAGCT TCGCCGACCG TGACCGCTTC GTGCTGTCCA ACGGCCACGG CTCGATGCTG ATCTACTCGC TGCTGCACCT GACCGGCTAC GACGTCACCA TCGATGACAT CAAAGGCTTC CGCCAACTGC ACAGCCGCAC CCCGGGCCAC CCGGAATACG GCTACACCCC AGGCGTTGAA ACCACCACCG GCCCGCTCGG CCAGGGTATC GCCAACGCCG TGGGCTTCGC CCTGGCCGAA AAAGTACTGG CTGCCCAGTT CAACCGTGAC GGCCACAATA TCGTCGACCA CAACACCTAT GTGTTCCTCG GCGACGGCTG CATGATGGAA GGCATCTCCC ATGAAGTCGC CTCGCTGGCC GGCACCCTGG GCCTGAACAA GCTGATCGCC TTCTACGATG ACAATGGCAT CTCCATCGAC GGCGAAGTGC ACGGCTGGTT CACCGACAAC ACCCCGGCGC GCTTCGAAGC CTACAACTGG CAGGTGATCC GCAACGTCGA CGGCCACGAT GCCGAAGAAA TCAAGATGGC CATCGAGACC GCCCGCAAGA GCGATCGCCC GACCCTGATC TGCTGCAAGA CCACCATCGG TTTCGGTTCG CCGAACAAGC AGGGCAAGGA AGACTGCCAC GGTGCCCCGC TGGGCAACGA CGAAATCGCC CTGACCCGCC AGGCCCTGAA CTGGAACCAC GGCCCGTTCG AAATCCCGGC CGACATCTAC GCCGAGTGGG ATGCCAAGGC CGCCGGTGCC AAGGTTGAAG CCGAGTGGAA CCAGCGCTTC GACGCCTACG CCAAGGCCTA CCCGGAGCTG GCTGCCGAGT TCAAGCGCCG TGCCAGCGGC GAGCTGCCGG CCGACTTCAG CGAAAAGGCC CAGGCCTACA TCAACGAAGT GGCTGCCAAA GGCGAAACCA TCGCCAGCCG CAAGGCCAGC CAGAACGCCC TGAACGCCTT CGGCCCGCTG CTGCCCGAGT TCCTCGGCGG TTCGGCGGAC CTGGCCGGCT CCAACCTGAC CCTGTGGAAA GGTTGCAAGG GCGTCGAAGC CAATGACGCC AGCGGCAACT ACGTGTTCTA CGGCGTGCGC GAGTTCGGCA TGACCGCCAT CATGAACGGC GTTGCCCTGC ACGGTGGCCT GGTGCCTTAC GGCGCGACCT TCCTGATGTT CATGGAATAC GCCCGCAACG CCGTGCGCAT GTCGGCCCTG ATGAAGCAGC GCGTGATCCA CGTGTACACC CACGACTCCA TCGGTCTGGG CGAAGACGGC CCGACGCACC AGCCGATCGA GCAGCTGACC AGCCTGCGCA GCACCCCGAA CCTGGACACC TGGCGCCCGG CCGACGCGGT GGAATCCGCC GTGTCCTGGA AAAACGCCCT GGAGCGCAAG GACGGCCCAT CGGCGCTGAT CTTCTCGCGC CAGAACCTGC AGCACCAGGA TCGCGATGCC CAGCAGATCG CCGACATCAG CCGCGGTGGT TATGTGCTCA AGGACTGCGC CGGCGAGCCT GAACTGATTC TGATCGCCAC CGGTTCCGAA GTGGGCCTGG CTGTTCAGGC CTTCGACAAG CTGACCGAGC AAGGCCGCAA GGTGCGCGTG GTTTCCATGC CATGCACCAG CGTGTTCGAT GCCCAGGACG CTGCCTACAA GCAGTCCGTG CTGCCGCTGG AAGTCGGTGC GCGCATCGCC ATCGAAGCTG CCCACGCCGA CTTCTGGTAC AAGTACGTCG GCCTGGAAGG TCGTATCATC GGCATGACCA CCTACGGTGA GTCGGCGCCG GCTTCGGCAT TGTTCGAAGA GTTTGGCTTC ACCCTGGAGA ACATCCTCGG TACTGCCGAA GAGCTGCTGG AAGACTGA
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Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPS NPSFADRDRF VLSNGHGSML IYSLLHLTGY DVTIDDIKGF RQLHSRTPGH PEYGYTPGVE TTTGPLGQGI ANAVGFALAE KVLAAQFNRD GHNIVDHNTY VFLGDGCMME GISHEVASLA GTLGLNKLIA FYDDNGISID GEVHGWFTDN TPARFEAYNW QVIRNVDGHD AEEIKMAIET ARKSDRPTLI CCKTTIGFGS PNKQGKEDCH GAPLGNDEIA LTRQALNWNH GPFEIPADIY AEWDAKAAGA KVEAEWNQRF DAYAKAYPEL AAEFKRRASG ELPADFSEKA QAYINEVAAK GETIASRKAS QNALNAFGPL LPEFLGGSAD LAGSNLTLWK GCKGVEANDA SGNYVFYGVR EFGMTAIMNG VALHGGLVPY GATFLMFMEY ARNAVRMSAL MKQRVIHVYT HDSIGLGEDG PTHQPIEQLT SLRSTPNLDT WRPADAVESA VSWKNALERK DGPSALIFSR QNLQHQDRDA QQIADISRGG YVLKDCAGEP ELILIATGSE VGLAVQAFDK LTEQGRKVRV VSMPCTSVFD AQDAAYKQSV LPLEVGARIA IEAAHADFWY KYVGLEGRII GMTTYGESAP ASALFEEFGF TLENILGTAE ELLED
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