Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4963 |
Symbol | pgk |
ID | 1044025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5653306 |
End bp | 5654469 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148364 |
Product | phosphoglycerate kinase |
Protein accession | NP_747066 |
Protein GI | 26991641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.37087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGT TGAAGATGAC CGACCTCGAC CTGCAAGGTA AGCGCGTACT GATCCGCGAA GACCTCAACG TGCCTGTGAA GGACGGTGTG GTAGCCAGCG ATGCGCGTAT CCTGGCAGCG CTGCCGACCA TCAAGCTGGC CCTGGAGAAG GGCGCAGCGG TAATGGTCTG CTCGCACTTG GGCCGCCCGA CCGAAGGCGA ATTCTCTGCC GAGAACAGCC TCAAGCCGGT CGCCGATTAC CTGAGCAAGG CCCTGGGCCG CGACGTGCCG CTGGTTGCCG ACTACCTGGA CGGTGTCGCG GTACAGGCCG GTGAACTGGT GCTGTTCGAG AACGTGCGCT TCAACAAGGG CGAGAAAAAG AACGCCGACG AGCTGGCGCA GAAATACGCA GCCCTGTGCG ACGTATTCGT CATGGACGCT TTCGGCACCG CACACCGCGC CGAAGGCTCG ACCCATGGCG TCGCCAAGTT CGCCAAGGTG GCCGCTGCCG GCCCACTGCT GGCAGCCGAA CTGGATGCCT TGGGCAAGGC CCTGAAAGCC CCGGCCAAGC CAATGGCGGC CATCGTTGCC GGCTCCAAGG TTTCCACCAA GCTGGACGTG CTGAACAGCC TCAGCAGTGT TTGCGACCAG CTGATCGTCG GTGGCGGTAT TGCCAACACT TTCCTGGCCG CTGCCGGCCA CCCGGTGGGC AAGTCGCTGT ACGAGCCTGA CCTGGTGGAC ACCGCCAAGG CCATTGCCGC CAAGGTCAGC GTGCCGCTGC CAGTCGACGT GGTGGTTGCC AAGGAGTTTG CCGAGAGCGC CGAAGCCACC GTCAAGGCCA TTGCCGACGT AGCTGCCGAC GACATGATCC TGGACATCGG CCCGCAAACC GCGGCCAATT TCGCCGAGCT GCTGAAATCG TCGAAAACCA TTCTTTGGAA TGGCCCGGTT GGCGTGTTCG AATTCGATCA GTTCGGCAAC GGCACCAAGG TACTGGCCAA GGCCATCGCC GACAGCGCCG CGTTCTCCAT CGCCGGTGGC GGTGACACCC TGGCAGCCAT CGACAAATAT GGCGTCAGCA AGGAAATCTC CTACATTTCT ACCGGTGGTG GCGCCTTCCT CGAGTTCGTC GAGGGCAAGG TCCTGCCAGC TGTGGCAATT CTGGAAGAGC GGGCCAAGGC CTGA
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Protein sequence | MTVLKMTDLD LQGKRVLIRE DLNVPVKDGV VASDARILAA LPTIKLALEK GAAVMVCSHL GRPTEGEFSA ENSLKPVADY LSKALGRDVP LVADYLDGVA VQAGELVLFE NVRFNKGEKK NADELAQKYA ALCDVFVMDA FGTAHRAEGS THGVAKFAKV AAAGPLLAAE LDALGKALKA PAKPMAAIVA GSKVSTKLDV LNSLSSVCDQ LIVGGGIANT FLAAAGHPVG KSLYEPDLVD TAKAIAAKVS VPLPVDVVVA KEFAESAEAT VKAIADVAAD DMILDIGPQT AANFAELLKS SKTILWNGPV GVFEFDQFGN GTKVLAKAIA DSAAFSIAGG GDTLAAIDKY GVSKEISYIS TGGGAFLEFV EGKVLPAVAI LEERAKA
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