Gene PP_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4958 
Symbol 
ID1044074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5648521 
End bp5649060 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID637148359 
Producthypothetical protein 
Protein accessionNP_747061 
Protein GI26991636 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAGAA TCGGCATTCG TTACGCCGAA TACAGCGCCA TGACCGTACT ACGTTACTTG 
CAAGCCTACC CCCCGCACCT GCAGGCGCAG GTGCGGCAGA TGATCGACAG CGACCGCCTG
GGTGAATACC TGCAGCGCCG TTACCCTGAC CGCCATGACG TGCAAAGCGA CAAGGCGCTG
TATGGCTATG CCCAGGATCT GCGCCAACAG TACCTGCGAA GTGCGCCAAA CCTGGACAAG
GTACTGTTCG ACAGCCGCCT CGATCTGACG CATCGGGCCC TGGGCTTGAA CACGGCGGTG
TCGCGGGTGC AGGGTGGCAA GCTCAAGGCG AAGAAGGAAA TCCGCATTGC CTCGCTGTTC
AAGGAGGCCG CGCCACAGTT CTTGCGCATG ATTGTTGTGC ACGAGTTGGC GCACCTGCGC
GAGCGAGATC ACAACAAAGC GTTCTACCAG CTCTGCCAGC ACATGGAGCC GGACTATCAC
CAACTGGAAT TCGACCTGCG CGTCTACCTG ACCTATCGGG AGCTGCCGGG CAACCTCTAA
 
Protein sequence
MARIGIRYAE YSAMTVLRYL QAYPPHLQAQ VRQMIDSDRL GEYLQRRYPD RHDVQSDKAL 
YGYAQDLRQQ YLRSAPNLDK VLFDSRLDLT HRALGLNTAV SRVQGGKLKA KKEIRIASLF
KEAAPQFLRM IVVHELAHLR ERDHNKAFYQ LCQHMEPDYH QLEFDLRVYL TYRELPGNL