Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4955 |
Symbol | |
ID | 1043889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5646845 |
End bp | 5647582 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148356 |
Product | hypothetical protein |
Protein accession | NP_747058 |
Protein GI | 26991633 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCAC TGCTTTGTGT TCTGGGATTG CTGGCAACGA TGCTGGCAAC ACCTGCCCCG GGTCACGCCA AGCTACGCCT GGTGGCCGAT AGCTGGCCAC CGTTCACCGA TGCCAAGATG CCGGGCGGTG GCCTTGCGAC CAGCATCGTT ACCACGGCAC TGGCGCGTGC CGGCTACGCC AGCGGCTATG AAGAGGTGCC GTGGGCGCGT GCGTTGCTGG GGGTAGGTGA AGGGCGCTAC GACGTGCTGA TCAATGCCTG GTACAACGAC TCGCGCGCCA ATATCGGGCA ATTCTCCAGC GCCTACCTGA GTAATCGTAT TCGCCTGCTG CAGCGTAAGG GCGAGGCGTT TAGCTACAAG CGTCTGTCTG ACCTTTATGC CTATAGCATT GCCGTAGTGC GTGATTACGC CTATTCACCG GAATTCGACG GGGATCCCCG TCTGCACAAA GTGCCGGTGC GCAACTTTTC TTCTGCGGTA CGCATGTTGG CGGCAGGGCG GGTAAGCCTG GCGGTGGAAG ACGAGTACGT GGCCCGCTAC AACCTGCAGC GTGAGCCGCA GGACGTGCGT GATGGGGTGA TGCTGGTGGA TCCGCCGCTG GGGGAGAACA CCCTGCATAT TCTGGTCAGC CTGAAGCACC CGGAGCATGA TCGGATCGTC GAGCGCTTCG AGCAGGCGAT AGCGGCGATG AAGGCCGATG GCAGCTATGC CCGGCTGCTG CGTCAGTACG GCTTTTGA
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Protein sequence | MRPLLCVLGL LATMLATPAP GHAKLRLVAD SWPPFTDAKM PGGGLATSIV TTALARAGYA SGYEEVPWAR ALLGVGEGRY DVLINAWYND SRANIGQFSS AYLSNRIRLL QRKGEAFSYK RLSDLYAYSI AVVRDYAYSP EFDGDPRLHK VPVRNFSSAV RMLAAGRVSL AVEDEYVARY NLQREPQDVR DGVMLVDPPL GENTLHILVS LKHPEHDRIV ERFEQAIAAM KADGSYARLL RQYGF
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