Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4953 |
Symbol | |
ID | 1041665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5643333 |
End bp | 5644514 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148354 |
Product | hypothetical protein |
Protein accession | NP_747056 |
Protein GI | 26991631 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.683781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTCCA CCGACGTGAT CATCCTTGGC GCCGGCGCCG CCGGCCTGAT GTGCGCCCAG CTCAGTGCCC GTAGCGGCCG CCGGGTGCTG CTGCTCGACC ACGCCAACAA GCCAGGCAAG AAAATCCTCA TGTCCGGCGG CGGGCGTTGC AACTTCACCA ACCTGTACAC CGAGCCGGCC AACTTCCTTT CGCACAACGC GCACTTCTGC AAGTCGGCCC TGGCCCGCTA CACCCAGTGG GACTTCATCG AGCTGGTGTG CAAGCACGGC GTGGCGTACC ACGAGAAGAA GCTCGGCCAG CTGTTCTGTG ACAACAAGGC CAGCGACATC CTCGACATGC TGCTGGCCGA GTGCGACGAG GCCGGTGCCG AGATCCGCAT GCACACCAGC ATCGAACAGA TCGAGAAGAC CGAAAGCGGC TACCTGCTGC AGACCAGCGG CGGCCAGTTC GCCTGCCAGT CGCTGGTCAT CGCCACCGGC GGCCTGTCGA TCCCGACCCT GGGCGCCACC GGTTTCGGCT ACCAGGTGGC CCGCCAGTTC GGCCACACCC TGCTGCCAAC CCGCGCTGGG CTGGTGCCAT TCACCATCAC CGAGCCCCAA CTCAAGGCGA TGTGCACCGA GTTGTCCGGC ACCTCGCTGG ACTGCACCGC CAGCTGCAAT GGCACCAGCT TCCGCGAAAA CCTGCTGTTC ACGCACCGCG GCCTGAGCGG CCCGGCAATC TTGCAGATCT CGTCGTTCTG GGAAGCCGGT GACACGGTCG AGATCAACCT GTTGCCCGAC CGCGATGCGC TTTCCTGGCT GCAACAGATG CAGGCCGAAC GCGCCAACGC CGAACTGAAG ACCGTGCTGG GCGAGGTGTT CACCCGCAAG CTGGCCAACT TGCTGGCCGA GCAGTGGTTC GAGTCGAAGC CAATGAAGCA GTACACCCCG GCGGAACTGG CGCAAATCGC CGAAAAGCTG GCGAACTGGC AGGTAGTACC GGCCGGCACC GAAGGCTACC GCACCGCCGA AGTGACCCTG GGCGGCGTGG ATACCCGCGA GGTGTCGTCC AAGACCATGG AATCGCTGAA AAGCCCGGGG TTGTACTTCA TCGGTGAAGT GCTGGATGTC ACCGGCCACC TGGGCGGCTT CAACTTCCAG TGGGCTTGGG CATCGGCGAA CGCCGCCGCG CAGTTCGTGT AG
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Protein sequence | MHSTDVIILG AGAAGLMCAQ LSARSGRRVL LLDHANKPGK KILMSGGGRC NFTNLYTEPA NFLSHNAHFC KSALARYTQW DFIELVCKHG VAYHEKKLGQ LFCDNKASDI LDMLLAECDE AGAEIRMHTS IEQIEKTESG YLLQTSGGQF ACQSLVIATG GLSIPTLGAT GFGYQVARQF GHTLLPTRAG LVPFTITEPQ LKAMCTELSG TSLDCTASCN GTSFRENLLF THRGLSGPAI LQISSFWEAG DTVEINLLPD RDALSWLQQM QAERANAELK TVLGEVFTRK LANLLAEQWF ESKPMKQYTP AELAQIAEKL ANWQVVPAGT EGYRTAEVTL GGVDTREVSS KTMESLKSPG LYFIGEVLDV TGHLGGFNFQ WAWASANAAA QFV
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