Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4950 |
Symbol | |
ID | 1041751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5638904 |
End bp | 5640223 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148351 |
Product | hypothetical protein |
Protein accession | NP_747053 |
Protein GI | 26991628 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACG CTTTCGAAAC CCTGGTCGGG GAGGTGCACG CCGCCCTTCA GGCGGGCGAG CAGTTCACCC TCGGTTACAG TGCCGAGCAA TCGCAGTTCG TGCGTTTCAA CCATGCCAAG GTGCGCCAGG CCGGCGAAGT CAGCCAGGCC AGCGCGCAAC TGCGGCTGGT GCGCGATGGG CGCCAGGCGG AACAGCAGGT GACCTTGAGC GGCGACGTGC AACTGGATCG CCAGCGCCTG AACGTTGCGC TCGAGCAGCT GCGCCAGACC TTGCCGCTGC TGGCGCTCGA CCCTTACCTG CGCCTGGACG AAAACGCCTG GCACAGCCAT AGCCTGCAGG AACCCCCCCT GCCCGCACTG AACGAAGTAC TGGCCCTGCT CGAGCGTGAA GCAGGTGACC TGGACCTGGT CGGCATCTAC GCCGCCGGCC CGGTATGCCG CGGCTTCGCC AGCTCGTTCG GCGCCTTCGG CTGGCACCAG GCCAACAGTT TCAACGTCGA CTGGAGCCTG TTCCACGATA ATGGCCAGGC AGTGAAGGCC AACTATGCCG GCCAGGCCTG GAGTGCCGAC GACTTCACCG CACGCCTGCG CCAAGCACGA GAGCAGTTGG GTTTCCTCGG CCGCCCGGCA GTTACCCTCA AGCCCGGCAC CTACCGCGCC TACCTTGCAC CTGCGGCCAT GGACGAAGTC GCCGGCATGT TGTGCTGGGG CGGCTTTTCC GCGCAGGCCC TGGCCACTGG CAACAGCGCT CTGCAGCGCC TGTACAACGG CGATGCACGG CTTAGCCCGC TGGTCAGTTT TACCGAGCAG GTCAGCGGCT CGCTTAGCCC GGCATTTTCC GATGAAGGTG CGCCGCGCCT GGATGTGCCG CTGATCCAGC AAGGCGAGGC CCGGCAGCGG TTGATCAGTG CGCGCAGTGC GGCCGAGTTC GAGCTGCAGG CCAATGGCGC CGACGGCTAC GAGTCGCCCT GTGCGCTCAG CCTGGCGCCG GGCAATCTGG CCAGTGCGCA GATCCTTGAG CGTCTAGGCA CCGGGCTGTA CATCAGCAAC CTGTGGTACC TGAACTACTC AGACCTGCCA GCGGCGCGCA TGACCGGGCT GACCCGCTTC GCCACTTTCT GGGTAGAAGA CGGGCAGATC CAGGGGCCGG TGAGTACCAT GCGCTTCGAT GACAGCTTGT ACAGCTTGCT GGGCAGCCAG CTGGAGGACC TGACCCAGGA GCGCGAGATG ATCCTGTCGA CCAGTACTTA TGGACAGCGC AGTACCGGGT CGAGTCATTT GCCCGGGGCA CTGGTCAAAG GCCTGACCCT GACATTGTGA
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Protein sequence | MKHAFETLVG EVHAALQAGE QFTLGYSAEQ SQFVRFNHAK VRQAGEVSQA SAQLRLVRDG RQAEQQVTLS GDVQLDRQRL NVALEQLRQT LPLLALDPYL RLDENAWHSH SLQEPPLPAL NEVLALLERE AGDLDLVGIY AAGPVCRGFA SSFGAFGWHQ ANSFNVDWSL FHDNGQAVKA NYAGQAWSAD DFTARLRQAR EQLGFLGRPA VTLKPGTYRA YLAPAAMDEV AGMLCWGGFS AQALATGNSA LQRLYNGDAR LSPLVSFTEQ VSGSLSPAFS DEGAPRLDVP LIQQGEARQR LISARSAAEF ELQANGADGY ESPCALSLAP GNLASAQILE RLGTGLYISN LWYLNYSDLP AARMTGLTRF ATFWVEDGQI QGPVSTMRFD DSLYSLLGSQ LEDLTQEREM ILSTSTYGQR STGSSHLPGA LVKGLTLTL
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