Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4947 |
Symbol | putA |
ID | 1043945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5630466 |
End bp | 5634419 |
Gene Length | 3954 bp |
Protein Length | 1317 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148348 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | NP_747050 |
Protein GI | 26991625 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTA CCACCCTTGG GGTCAAACTC GACGACCCGA CCCGTGAGCG ACTCAAAGCA GCTGCGCAGT CCATCGACCG CACGCCTCAC TGGTTGATCA AGCAAGCGAT CTTCAATTAC CTGGAGAAGC TCGAGGGTGG TGCCACCCTG ACCGAACTCA ACGGTCATGC CAGCAACCCG GCCGACGATG CCGGTGAAGT CCAGGCCGAC CACAGCCACC AGTGCTTCCT CGAATTTGCC GAGAGCATCT TGCCGCAGTC GGTACTGCGC TCGGCGATCA CCGCCGCCTA CCGCCGCCCC GAGCAGGAAG TGGTGCCGAT GCTGCTGGAG CAGGCGCGCC TGAGCGCGCC GCTGGCCGAC GCCACCAACA AGCTGGCCGC AAGCATTGCC GAAAAACTGC GCAACCAGAA AAGCGTCGGC GGCCGTGCCG GTATCGTCCA GGGCCTGCTG CAGGAATTCT CGCTGTCGTC TCAGGAAGGC GTGGCGCTGA TGTGCCTGGC CGAAGCCCTG CTGCGTATCC CCGACAAAGG TACCCGTGAT GCGCTGATCC GCGACAAGAT CAGTACCGGC AACTGGCAGC CGCACCTGGG CAACAGCCCG TCACTGTTCG TCAACGCCGC CACCTGGGGG CTGCTGCTGA CCGGCAAGCT GGTCAGCACC CATAACGAAA CCGGCCTCAC CTCCTCGCTC ACCCGCATCA TCGGCAAGAG CGGCGAGCCG ATGATCCGCA AGGGCGTCGA CATGGCCATG CGCCTGATGG GTGAGCAGTT CGTCACCGGC GAGACCATTG CCGAAGCCCT GGCCAACGCC AGCCGTTTCG AGGCCAAAGG CTTCCGTTAC TCCTACGACA TGCTTGGCGA AGCCGCACTG ACCGAGCACG ACGCGCAGAA GTACCTGGCG TCCTACGAGC AGGCCATCCA CTCGATCGGC AAGGCCTCGC ATGGCCGTGG CATCTATGAA GGCCCAGGCA TCTCGATCAA GCTGTCGGCA CTGCACCCGC GCTACAGCCG GGCCCAGTAC GAGCGCGTGA TGGAAGAGCT GTACCCGCGC CTGCTGTCGC TGACCCTGCT GGCCAAGCAG TACGACATCG GCCTTAACAT CGACGCCGAA GAAGCCGACC GCCTGGAGCT TTCGCTGGAC CTGCTCGAAC GCCTGTGCTT CGAGCCATCC CTGGCTGGCT GGAACGGCAT CGGCTTCGTT ATCCAGGCCT ACCAGAAGCG CTGCCCGTAC GTGATCGACT ACGTCATCGA TCTGGCCAAG CGCAGCCGCC ACCGCCTGAT GATCCGCCTG GTAAAAGGCG CCTACTGGGA CAGCGAGATC AAGCGTGCCC AGGTCGAAGG CCTGGAAGGC TACCCGGTCT ATACCCGCAA GGTGTACACC GACGTGTCCT ACGTCGCCTG CGCCCGCAAG CTGCTGGCCG TGCCAGAAGC CATCTACCCG CAGTTCGCCA CCCACAACGC CCACACCCTG TCGGCCATCT ACCACATTGC CGGGCAGAAC TATTACCCGG GCCAGTACGA GTTCCAGTGC CTGCACGGCA TGGGCGAACC GCTGTACGAG CAAGTGGTCG GCAAGATTGC CGATGGCAAG CTGAACCGCC CGTGCCGCGT GTATGCACCG GTCGGCACCC ATGAAACGCT GCTGGCCTAC CTGGTGCGCC GCCTGCTGGA AAACGGCGCG AACACCTCGT TCGTCAACCG CATTGCCGAC CACTCGATTT CCATCCAGGA ACTGGTCGCC GACCCGGTGG CCAGCATCGA GCGCATGGGT ACCCAGGAAG GCAGTATCGG CCTGCCGCAC CCACGCATTC CCCTGCCGCG CGACCTGTAT GGCACCGAAC GGGCCAACTC GGCCGGCATC GACATGGCCA ATGAACACCG CCTGGCGTCG CTGTCCTGCG CCATGCTGGC CACCGCTCAC AACGACTGGA AGGCTGCCCC GCTGCTGGCC TGCGCCGCCA GCGAGAGCGC TGCCGCACCG GTGCTGAACC CGGCTGACCA CCGCGACGTC GTCGGCCATG TGCAGGAGGC CACCGTTGCC GACGTTGACA ACGCCATCCA GTGCGCACTG AACGCCGCGC CGATCTGGCA GGCCACCCCA CCAGCCGAGC GTGCTGCCAT TCTGGAGCGC ACCGCCGACC TGATGGAGGC CGAGATCCAG CCGCTGATGG GCCTGCTCAT CCGCGAGGCC GGCAAGACCT TCGCCAACGC CATTGCCGAA GTGCGTGAAG CCGTGGACTT CCTGCGCTAC TACGCGGTGC AGGCACGTAA CGACTTCAGC AACGACGCCC ACCGCCCACT GGGTCCTGTG GTGTGCATCA GCCCATGGAA CTTCCCGCTG GCGATCTTCA CCGGCCAGGT GGCCGCAGCC CTGGCTGCCG GCAACCCGGT ACTGGCCAAG CCTGCCGAGC AAACCCCACT GATCGCCGCC CAGGCCGTGC GCCTGCTGCT GGAAGCTGGC ATCCCAGAAG GCGTGCTGCA GCTGCTGCCG GGCCGCGGTG AAACTGTCGG TGCCGGCCTG GTCGGAGACG AGCGCGTCAA AGGCGTGATG TTCACCGGCT CCACTGAAGT GGCCCGCCTG CTGCAGCGCA ACGTCGCTGG CCGTCTGGAC AACCAGGGCC GCCCGATCCC GCTGATCGCC GAAACCGGCG GCCAGAACGC GATGATCGTC GACTCCTCGG CACTGACCGA ACAGGTCGTG ATCGACGTGG TGTCCTCGGC CTTCGACAGT GCCGGCCAGC GTTGCTCGGC CCTGCGCGTA CTGTGCTTGC AGGAAGACTC CGCCGACCGC GTAATCGAGA TGCTCAAGGG CGCCATGGCT GAAAGCCGCC TGGGCTGCCC GGACCGCCTG GCCGTGGACA TCGGCCCGGT GATCGATGCC GAAGCCAAAG CCGGCATCGA GAAGCACATC CAGGGCATGC GCGAGAAAGG CCGCCCGGTC TACCAAGTCG CCATTGCCGA TGCTGCCGAG ATCAAGCGCG GCACCTTCGT CATGCCAACC CTGATCGAGC TGGACAGCTT CGACGAGCTG AAGCGCGAAA TCTTCGGCCC CGTGCTGCAC GTGGTGCGCT ACAACCGCCG CAATCTGGAC CAGCTGATCG AGCAGATCAA CAACTCCGGC TACGGCCTGA CCCTCGGCGT GCACACCCGT ATCGACGAGA CCATCGCCAA AGTGGTGGAA ACCGCCAACG CCGGCAACAT GTACGTCAAC CGCAACATTG TGGGTGCAGT GGTGGGCGTG CAGCCGTTCG GTGGTGAAGG CCTGTCTGGC ACCGGCCCGA AAGCCGGCGG CCCGCTGTAC CTCTACCGCC TGCTGTCGAC CCGCCCGGCC GACGCCATTG GCCGCCACTT CCAGCAGCAG GACGGCGAAG GCACGCCGGA CCGCACCCTG CACGAACAGC TGGTAAAGCC GCTGCACGGC CTGAAGGCCT GGGCCGAGAA CAACCAGCTG GCCGACCTGG CCGCGCTGTG CAGCCAGTTC GCCAGCCAGT CGCAGAGCGG CATCGCCCGC CTGCTGCCAG GCCCGACCGG CGAGCGCAAC AGCTACACCA TTCTGCCGCG TGAGCACGTG CTGTGCCTGG CCGACAACGA AACCGACCTG CTGGCGCAGT TCGCCGCGGT ACTGGCCGTT GGCAGCTCGG CGGTGTGGGT TGACGGTGAA CCGGGCAAGG CCCTGCGCGC CCGCCTGCCG CGTGAGCTGC AGGCCAAGGT GAAGCTGGTC GCGGACTGGA ACAAGGATGA AGTGGCGTTC GACGCCGTGA TCCACCATGG CGACTCGGAC CAGCTGCGCG GCGTATGCCA GCAGGTGGCC AAGCGTGCCG GGGCGATCGT TGGGGTGCAC GGGCTGTCCA GCGGGGATCA CCAGATTGCG CTGGAGCGCC TGGTCATCGA GCGCGCGGTG AGCGTGAACA CTGCAGCGGC GGGTGGTAAC GCCAGCCTGA TGACCATTGG CTAA
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Protein sequence | MATTTLGVKL DDPTRERLKA AAQSIDRTPH WLIKQAIFNY LEKLEGGATL TELNGHASNP ADDAGEVQAD HSHQCFLEFA ESILPQSVLR SAITAAYRRP EQEVVPMLLE QARLSAPLAD ATNKLAASIA EKLRNQKSVG GRAGIVQGLL QEFSLSSQEG VALMCLAEAL LRIPDKGTRD ALIRDKISTG NWQPHLGNSP SLFVNAATWG LLLTGKLVST HNETGLTSSL TRIIGKSGEP MIRKGVDMAM RLMGEQFVTG ETIAEALANA SRFEAKGFRY SYDMLGEAAL TEHDAQKYLA SYEQAIHSIG KASHGRGIYE GPGISIKLSA LHPRYSRAQY ERVMEELYPR LLSLTLLAKQ YDIGLNIDAE EADRLELSLD LLERLCFEPS LAGWNGIGFV IQAYQKRCPY VIDYVIDLAK RSRHRLMIRL VKGAYWDSEI KRAQVEGLEG YPVYTRKVYT DVSYVACARK LLAVPEAIYP QFATHNAHTL SAIYHIAGQN YYPGQYEFQC LHGMGEPLYE QVVGKIADGK LNRPCRVYAP VGTHETLLAY LVRRLLENGA NTSFVNRIAD HSISIQELVA DPVASIERMG TQEGSIGLPH PRIPLPRDLY GTERANSAGI DMANEHRLAS LSCAMLATAH NDWKAAPLLA CAASESAAAP VLNPADHRDV VGHVQEATVA DVDNAIQCAL NAAPIWQATP PAERAAILER TADLMEAEIQ PLMGLLIREA GKTFANAIAE VREAVDFLRY YAVQARNDFS NDAHRPLGPV VCISPWNFPL AIFTGQVAAA LAAGNPVLAK PAEQTPLIAA QAVRLLLEAG IPEGVLQLLP GRGETVGAGL VGDERVKGVM FTGSTEVARL LQRNVAGRLD NQGRPIPLIA ETGGQNAMIV DSSALTEQVV IDVVSSAFDS AGQRCSALRV LCLQEDSADR VIEMLKGAMA ESRLGCPDRL AVDIGPVIDA EAKAGIEKHI QGMREKGRPV YQVAIADAAE IKRGTFVMPT LIELDSFDEL KREIFGPVLH VVRYNRRNLD QLIEQINNSG YGLTLGVHTR IDETIAKVVE TANAGNMYVN RNIVGAVVGV QPFGGEGLSG TGPKAGGPLY LYRLLSTRPA DAIGRHFQQQ DGEGTPDRTL HEQLVKPLHG LKAWAENNQL ADLAALCSQF ASQSQSGIAR LLPGPTGERN SYTILPREHV LCLADNETDL LAQFAAVLAV GSSAVWVDGE PGKALRARLP RELQAKVKLV ADWNKDEVAF DAVIHHGDSD QLRGVCQQVA KRAGAIVGVH GLSSGDHQIA LERLVIERAV SVNTAAAGGN ASLMTIG
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