| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4943 |
|---|
| Symbol | |
|---|
| ID | 1043878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5624625 |
|---|
| End bp | 5625755 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148344 |
|---|
| Product | glycosyl transferase, putative |
|---|
| Protein accession | NP_747046 |
|---|
| Protein GI | 26991621 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC GCTCTGAACC GCGCATCCTG CAGTTCTGCC ATGGCTATGA CGGGCCGTTC
CTGGACTGCG CCCGTCAGTA CGCCAGCCTG TTTCAGGGGC GTGGGTACCA GGTGACCACG
GTATTCCTCA CCGGCGCCGC CGATGCGCAG GTGGCGGCTG GCTGTGCGTC GGACGAGGTG
CTGTTCCTTG AGTTCAGTTC CAAGGCCGTG CGTGGCCTGA AACTCGGCGC CATCCGCGCA
TTGCGGCGCA TTGCGGCCGA GCGCAATTTC GCTTTCTGCA TCGCCCACCG CTTCAAGCCG
ATCTACGTTG CCCTGCTGGG GACCGGCCTG CCGGTGATTG GTGTGCACCA TGCCTTTGGC
GACTACCAGC GCAAAGGCCG CCGCCTGTTC GCGAACCTGT TCAGCAAGCG TCTGAGCCTG
TTGGGTGTTT CGGACGCGGT ACGTGACGAT ATGCGCCGTT GCTTGCCGCA GTGGCCGGCC
GAACGCATCC AGACTCTGTA CAACCGCATC GACATCGACG CCCTGCAAGC AGCCCTGGTG
CCGCGCGCTG ACGCACGCCA GGCCTTGGGC CTGGATGCTC AGGCGTGGAT CGTCGGCAAT
GTTGGGCGCC TGCACCCGGA CAAGGATCAG GCCACCCTGT TGCGCGGTTT TGCCCAGGCA
CTGCCGGGGC TGCCGGCTGG CGCCCGCCTG GCAATCCTCG GCAAGGGGCG TCTGGAGGCC
AGGCTCAAGG CGTTGGCCGC CGAACTTGGC ATTGCCGGGC AAGTCGACTT TCTTGGCCAG
GTACCGGATG CGCGCCGTTA TTTCCAGGCG TTCGACGTGT TCGCTTTGAG TTCCGATCAC
GAGCCGTTCG GCATGGTCCT GCTCGAAGCG ATGGTTGCCG GTGTGCCGGT GTTGGCCACG
GCCTGTGGCG GTGCCCGCGA AGTGGTCGAG GGCGTTGGCG TGCTGTTCCC GCTGGGCGAC
GCCGCGCAGC TGGCCCAGGG CCTGCAGCAC ATGGCCGTAC TGGACGCTGG GCAGCGCCAG
GCCTGTGCCA GGCACATGCT GCAGCGCCTG GGTGAGCGTT TCTCTGATCA GGCGGTGCGC
GAGGCCTTCT GGCAACTCCC ACAGGTGCGC GCGTTGGTGG GGCAGGCCTG A
|
|---|
| Protein sequence | MTSRSEPRIL QFCHGYDGPF LDCARQYASL FQGRGYQVTT VFLTGAADAQ VAAGCASDEV
LFLEFSSKAV RGLKLGAIRA LRRIAAERNF AFCIAHRFKP IYVALLGTGL PVIGVHHAFG
DYQRKGRRLF ANLFSKRLSL LGVSDAVRDD MRRCLPQWPA ERIQTLYNRI DIDALQAALV
PRADARQALG LDAQAWIVGN VGRLHPDKDQ ATLLRGFAQA LPGLPAGARL AILGKGRLEA
RLKALAAELG IAGQVDFLGQ VPDARRYFQA FDVFALSSDH EPFGMVLLEA MVAGVPVLAT
ACGGAREVVE GVGVLFPLGD AAQLAQGLQH MAVLDAGQRQ ACARHMLQRL GERFSDQAVR
EAFWQLPQVR ALVGQA
|
|---|
| |