| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4921 |
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| Symbol | |
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| ID | 1041710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5592766 |
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| End bp | 5594049 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148322 |
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| Product | NCS1 nucleoside transporter |
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| Protein accession | NP_747024 |
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| Protein GI | 26991599 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family
[TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0951814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC CCAGCCAGTT CTCTCCCGAC CATCCAATCC CCATCCAGCA GCGCATTTTC
GGTGCTCGCG ACCTGTTTTC ACTGTGGTTT TCCCTCGGCA TCGGCCTGAT GGTGCTGCAG
GTCGGCGCCA TGCTGGCGCC AGGCCTAGGC CTTGCTGGCG CCGTGCTGGC CATCGCCCTG
GGCACCGGTG TCGGTGTGCT GTTGCTGGGT GCGGCGGGGG TTATCGGCAG CGACACCGGC
CTGTCCGCCA TGGGCACCCT GAAACTCAGC CTGGGCAGCC ATGGCGCGCG CTTGCCGGCG
CTGCTCAACT TGCTGCAACT GGTGGGTTGG GGCGCTTTCG AGATTATCGT CATGCGCGAT
GCTGCCAGCT TGCTGGGTGC GCGAGCGTTC GGTGAGGAAA GTGCCTGGAA CAGCCCCATG
CTCTGGACGC TGTGCTTCGG TGCCCTGGCC ACCCTGCTGG CTGTCAGCGG GCCACTGGCC
TTCGTGCGCA AGGTACTGCG CGCCTGGGGC ATCTGGTTGT TGCTGGGCGC TTGCCTGTGG
CTGACCTGGA ACCTGTTCGC CAAGGCCGAC CTGGCGGAGC TGTGGAACCG TGCCGGGGAT
GGTTCGATGT CGCTGGCGGT TGGCTTCGAT ATCGTCATCG CCATGCCGCT GTCCTGGCTG
CCGCTGATCG CGGACTACTC GCGCTTTGCC CGCAATGGCA GGCATGTGTT CGGCGGTACG
GTAGTGGGCT ACTTCATCGG CAACACCTGG CTGATGAGCC TGGGCGTGGC GTACACGCTG
GCGTTCGCCG CCAGTGGCGA AGTCAATGCC TTGCTGCTGG CCCTGGCGGG CGCCGGCATG
GGGATTCCGC TGCTGCTTAT TCTGCTGGAC GAGTCGGAAA AGGCCTTCGC CGACATCCAC
TCGGCGGCGG TTTCCACCGG TGTGCTGCTA CCGCTGAAGG TCGAGCACCT GGCGTTGGCC
ATCGGCGTGT TGTGCACCCT GATCGCCCTG TTGGCGCCAC TGGCACAGTA CGAAAACTTC
CTGTTGCTGA TCGGTTCGGT GTTCGCACCG CTGTTCGGCG TGGTGCTGAT GGACCACTAC
GTGGTCCGTC GACGCCGTCT GCCAGCACAG GTCAATGGCT TGCACTGGCA GGCGTTGGTG
GCCTGGTTTA CCGGAGTGGT GGCCTATCAC CTGATTGCCG CCAAGGCGCC CGAACTGGGC
GCCACCCTGC CCGCATTGCT GCTGGCAGGC GTGCTGCATG GGCTGCTAAG CCTCAGCCGC
GGCCGGGAAA CAGTTCAGGC TTGA
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| Protein sequence | MTSPSQFSPD HPIPIQQRIF GARDLFSLWF SLGIGLMVLQ VGAMLAPGLG LAGAVLAIAL
GTGVGVLLLG AAGVIGSDTG LSAMGTLKLS LGSHGARLPA LLNLLQLVGW GAFEIIVMRD
AASLLGARAF GEESAWNSPM LWTLCFGALA TLLAVSGPLA FVRKVLRAWG IWLLLGACLW
LTWNLFAKAD LAELWNRAGD GSMSLAVGFD IVIAMPLSWL PLIADYSRFA RNGRHVFGGT
VVGYFIGNTW LMSLGVAYTL AFAASGEVNA LLLALAGAGM GIPLLLILLD ESEKAFADIH
SAAVSTGVLL PLKVEHLALA IGVLCTLIAL LAPLAQYENF LLLIGSVFAP LFGVVLMDHY
VVRRRRLPAQ VNGLHWQALV AWFTGVVAYH LIAAKAPELG ATLPALLLAG VLHGLLSLSR
GRETVQA
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