| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4915 |
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| Symbol | parE |
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| ID | 1042640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5587239 |
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| End bp | 5589143 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148316 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | NP_747018 |
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| Protein GI | 26991593 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATC CCAGCGCTAG CGCCTATAAC GCAGACGCCA TCGAAGTCCT CTCGGGCCTT
GATCCGGTCC GCAAGCGGCC GGGCATGTAC ACCGATACCA GCCGCCCCAA CCACCTGGCC
CAGGAAGTCA TCGACAACAG TGTCGACGAA GCACTGGCCG GCCACGCGCG TTCGGTGCAG
GTCATCCTGC ATGCCGACCA TTCGCTGGAA GTCAGCGACG ACGGCCGCGG CATGCCGGTG
GACATCCATC CGGAAGAGGG CGTGTCCGGG GTCGAGCTGA TCCTTACCAA GCTGCACGCC
GGCGGTAAGT TCTCCAACAA GAACTATCAG TTTTCCGGCG GCTTGCACGG GGTGGGCATC
TCGGTGGTCA ATGCCTTGTC GACCCAGGTG CGCGTGCGCG TCAAACGTGA CGGCAATGAA
TACCAGATGA CCTTTGCCGA TGGCTTCAAG GCCAGCGAGC TGGAAGTGGT CGGCTCGGTC
GGCAAGCGCA ACACCGGCAC CAGCGTGTAC TTCAGCCCTG ACCCGAAGTA CTTCGATTCG
CCCAAGTTCT CCATCAGCCG CCTCAAGCAC GTGCTCAAGG CCAAGGCGGT ACTGTGCCCG
GGGCTGCTGG TCAGTTTCGA GGACAAGGCC AGCGGCGAAA AGGTGGAATG GCACTATGAG
GATGGTCTGC GCTCCTACCT GGTCGACTCG GTCAACGAAT TCCAGCGCCT GCCCGACGAG
CCGTTCTGTG GCAGCCTGGC GGGTAACAAG GAAGCGGTTG ACTGGGCTTT GCTGTGGCTG
CCCGAAGGCG GCGACAGCAT TCAGGAAAGC TACGTCAACC TGATCCCCAC CGCCCAGGGC
GGCACCCACG TCAACGGCCT GCGCCAGGGC CTGCTGGATG CCATGCGTGA GTTTTGCGAG
TTCCGCAACT TGCTGCCACG CGGGGTAAAG CTGGCGCCGG AAGACGTTTG GGAGCGCATC
ACCTTCGTAC TGTCGATGAA GATGCAGGAC CCGCAGTTCT CCGGGCAGAC CAAAGAGCGC
CTGTCATCAC GCGAGGCGGC CGCGTTCGTC TCCGGTGTGG TCAAGGATGC TTTCAGCCTG
TGGCTCAACG CCCACCCCGA GCTGGGCATG CAACTGGCAG AACTCGCCAT CAGCAACGCC
GGTCGCCGCC TCAAGGCCAG CAAGAAGGTC GAGCGCAAGC GCATCACCCA GGGCCCGGCA
TTGCCCGGCA AGCTGGCCGA TTGTGCAGGC CAGGACCCGA TGCGTGCCGA GTTGTTCCTC
GTCGAGGGTG ACTCGGCCGG TGGTTCGGCC AAGCAGGCGC GGGACAAGGA ATTCCAGGCC
ATCCTGCCGC TGCGCGGCAA GATCCTCAAC ACCTGGGAAG TGGACGGGGG CGAAGTCCTG
GCCAGCCAGG AAGTGCACAA CATTGCCGTG GCCATTGGCG TCGATCCGGG TGCAACCGAC
CTTGCGCAGC TGCGCTATGG CAAGATCTGC ATCCTCGCCG ACGCTGACTC CGATGGTCTG
CACATCGCCA CATTGCTGTG TGCGCTGTTC GTTCAACACT TCCGGACACT GGTCGAGGCT
GGGCATGTTT ACGTGGCCAT GCCGCCCCTG TACCGCATCG ACCTGGGCAA GGAAATCTAC
TACGCCCTCG ACGAAGCCGA GCGTGACGGC ATCCTCGACC GCCTGGTGGC CGAGAAGAAG
CGCGGCAAGC CGCAGGTAAC ACGCTTCAAG GGCCTGGGCG AGATGAACCC GCCGCAGTTG
CGCGAAACCA CCATGGACCC GAACACCCGG CGCCTGGTGC AGCTGACCCT GGACGACGTA
GAGGCCACCT GCGAGCTGAT GGACAAGCTG CTGGCCAAGA AGCGCGCCGG TGACCGCAAG
AGTTGGCTGG AAACCAAAGG CAACCTGGCC GAGGTCATGG TTTGA
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| Protein sequence | MANPSASAYN ADAIEVLSGL DPVRKRPGMY TDTSRPNHLA QEVIDNSVDE ALAGHARSVQ
VILHADHSLE VSDDGRGMPV DIHPEEGVSG VELILTKLHA GGKFSNKNYQ FSGGLHGVGI
SVVNALSTQV RVRVKRDGNE YQMTFADGFK ASELEVVGSV GKRNTGTSVY FSPDPKYFDS
PKFSISRLKH VLKAKAVLCP GLLVSFEDKA SGEKVEWHYE DGLRSYLVDS VNEFQRLPDE
PFCGSLAGNK EAVDWALLWL PEGGDSIQES YVNLIPTAQG GTHVNGLRQG LLDAMREFCE
FRNLLPRGVK LAPEDVWERI TFVLSMKMQD PQFSGQTKER LSSREAAAFV SGVVKDAFSL
WLNAHPELGM QLAELAISNA GRRLKASKKV ERKRITQGPA LPGKLADCAG QDPMRAELFL
VEGDSAGGSA KQARDKEFQA ILPLRGKILN TWEVDGGEVL ASQEVHNIAV AIGVDPGATD
LAQLRYGKIC ILADADSDGL HIATLLCALF VQHFRTLVEA GHVYVAMPPL YRIDLGKEIY
YALDEAERDG ILDRLVAEKK RGKPQVTRFK GLGEMNPPQL RETTMDPNTR RLVQLTLDDV
EATCELMDKL LAKKRAGDRK SWLETKGNLA EVMV
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