Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4910 |
Symbol | |
ID | 1041709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5580962 |
End bp | 5582419 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148311 |
Product | hypothetical protein |
Protein accession | NP_747013 |
Protein GI | 26991588 |
COG category | [R] General function prediction only |
COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGGC CCACGCCAGT CAAACCAGAC AATTTCTTCC TGATGATCTA TCGCGCCCTG AGTCAACGTC GTGTGCCGCT GGCACTGCGC ATCGCCTGCA CCAACATTTT CCTGGTGGCG CTGGCGCTGG TGATCTACGC CTGCGTGATG GGCCTGCAGT TCAAGCAGGC CATGCATGAG CAGGCCGATG CCTTGGGCCA GAGCCTGACC ACCCAGACTG CAACATCGGC CACCGAGCTG CTGGTGTCCA ACGACATCCT CAGTCTCAAC GTGCTACTGG GCAACCTGGT TAAAAACCCG CTGGTGGCCC ATGCGGCAAT CTACAGCGTG GATAACCGTA TCCTCGCCGA AGCCGGCCAG CGCCCGCGCA ATAGCCTGCT GGGCGAGGCC GAAGGCCTGT ACCAGACCAA AATCACGTTC CAGGACGTGA CGGCCGGGCA GCTGCGCATA AGCCTGGACA TGAGCCAGTT CCAGCAGCCG ATGCTGATCA GCCTGCAGAG CATGGGCATT CTGGCCGCCA TCCTGCTTAC CCTGGCCTTG GCCCTCAGCT TGCGTCAGGG TCGCTTCATC ACCCTGCCAC TGCTGCAACT GCGGGTATGG CTGCGCGACC CGCAGCCCTA TACCCCGGCC ACCGACCGCC AGGACGAGAT TGGCGACATC GCCCGCCAGC TGCATGCACG CCTGGCCCCG CCTCCGCCCC CGGAGCCGGA GCCCGAGGAA GACGACGACG AGCAGTTCGA CGACCTGCAC GCAGCGGCCC CGGCACCCAA GGCCGCACCG CGCGCCAAGG TTGCCCTGGA AGACGAGGAT GACGACGAAG CCTTCGCCGG CCTGCTGGAC GACGACACTG CCCCCAAAGC CGCCGCAGAG GTCGAGTCCG ACGAGCCGCA GTACAGCGCT GTGCTTGCCG TGCAGCTGGG CTCGCAGGAG CAACTGCGTC GCCTGCCACG CACACGCCTG GCCGAGCTGA CCGAGCGCTA CCGTGATTGC CTGGAGCACG CGGCCTCGCT CTACGACGGC GAAACGCACA CGCTGAACGA CGGCAGCACC CTGGTGCTGT TCCACAGCCG CGAGTGTGGC GAGGACTACC TGACCAACGC CATTTGCTGT GGCGAACTGT TGCGCGCCCT GGGCCACGCC CTGCAGATCG AGGTAGCTGA CAGCGGCATT ACCCTGCAAC TGCAGCTAGG CCTGGTCTTG GGCAACGACC TGCATGGGCT GGAACTGGTT GACCTGTTGA TGGCCGAGAA GGTCCAGGAT GCCCTGGCAC TGTCGCAGCA CAGCCGTAAC CTGTTGCTGG TAGAGCGGCA GATCAACGAT GACGCCCTCA TTCGCCAGCG TGCGCGTATT CGCCCGATCG CCAGCCCCGA AGGCGCCTGC TGTGTGGAGC GACTTATGGA GCCCTACCCG TCAATGCTGG AACGGCAACT GGCGCGCATG CATGAGCACC GCGCCTGA
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Protein sequence | MNRPTPVKPD NFFLMIYRAL SQRRVPLALR IACTNIFLVA LALVIYACVM GLQFKQAMHE QADALGQSLT TQTATSATEL LVSNDILSLN VLLGNLVKNP LVAHAAIYSV DNRILAEAGQ RPRNSLLGEA EGLYQTKITF QDVTAGQLRI SLDMSQFQQP MLISLQSMGI LAAILLTLAL ALSLRQGRFI TLPLLQLRVW LRDPQPYTPA TDRQDEIGDI ARQLHARLAP PPPPEPEPEE DDDEQFDDLH AAAPAPKAAP RAKVALEDED DDEAFAGLLD DDTAPKAAAE VESDEPQYSA VLAVQLGSQE QLRRLPRTRL AELTERYRDC LEHAASLYDG ETHTLNDGST LVLFHSRECG EDYLTNAICC GELLRALGHA LQIEVADSGI TLQLQLGLVL GNDLHGLELV DLLMAEKVQD ALALSQHSRN LLLVERQIND DALIRQRARI RPIASPEGAC CVERLMEPYP SMLERQLARM HEHRA
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