Gene PP_4910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4910 
Symbol 
ID1041709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5580962 
End bp5582419 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content65% 
IMG OID637148311 
Producthypothetical protein 
Protein accessionNP_747013 
Protein GI26991588 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGGC CCACGCCAGT CAAACCAGAC AATTTCTTCC TGATGATCTA TCGCGCCCTG 
AGTCAACGTC GTGTGCCGCT GGCACTGCGC ATCGCCTGCA CCAACATTTT CCTGGTGGCG
CTGGCGCTGG TGATCTACGC CTGCGTGATG GGCCTGCAGT TCAAGCAGGC CATGCATGAG
CAGGCCGATG CCTTGGGCCA GAGCCTGACC ACCCAGACTG CAACATCGGC CACCGAGCTG
CTGGTGTCCA ACGACATCCT CAGTCTCAAC GTGCTACTGG GCAACCTGGT TAAAAACCCG
CTGGTGGCCC ATGCGGCAAT CTACAGCGTG GATAACCGTA TCCTCGCCGA AGCCGGCCAG
CGCCCGCGCA ATAGCCTGCT GGGCGAGGCC GAAGGCCTGT ACCAGACCAA AATCACGTTC
CAGGACGTGA CGGCCGGGCA GCTGCGCATA AGCCTGGACA TGAGCCAGTT CCAGCAGCCG
ATGCTGATCA GCCTGCAGAG CATGGGCATT CTGGCCGCCA TCCTGCTTAC CCTGGCCTTG
GCCCTCAGCT TGCGTCAGGG TCGCTTCATC ACCCTGCCAC TGCTGCAACT GCGGGTATGG
CTGCGCGACC CGCAGCCCTA TACCCCGGCC ACCGACCGCC AGGACGAGAT TGGCGACATC
GCCCGCCAGC TGCATGCACG CCTGGCCCCG CCTCCGCCCC CGGAGCCGGA GCCCGAGGAA
GACGACGACG AGCAGTTCGA CGACCTGCAC GCAGCGGCCC CGGCACCCAA GGCCGCACCG
CGCGCCAAGG TTGCCCTGGA AGACGAGGAT GACGACGAAG CCTTCGCCGG CCTGCTGGAC
GACGACACTG CCCCCAAAGC CGCCGCAGAG GTCGAGTCCG ACGAGCCGCA GTACAGCGCT
GTGCTTGCCG TGCAGCTGGG CTCGCAGGAG CAACTGCGTC GCCTGCCACG CACACGCCTG
GCCGAGCTGA CCGAGCGCTA CCGTGATTGC CTGGAGCACG CGGCCTCGCT CTACGACGGC
GAAACGCACA CGCTGAACGA CGGCAGCACC CTGGTGCTGT TCCACAGCCG CGAGTGTGGC
GAGGACTACC TGACCAACGC CATTTGCTGT GGCGAACTGT TGCGCGCCCT GGGCCACGCC
CTGCAGATCG AGGTAGCTGA CAGCGGCATT ACCCTGCAAC TGCAGCTAGG CCTGGTCTTG
GGCAACGACC TGCATGGGCT GGAACTGGTT GACCTGTTGA TGGCCGAGAA GGTCCAGGAT
GCCCTGGCAC TGTCGCAGCA CAGCCGTAAC CTGTTGCTGG TAGAGCGGCA GATCAACGAT
GACGCCCTCA TTCGCCAGCG TGCGCGTATT CGCCCGATCG CCAGCCCCGA AGGCGCCTGC
TGTGTGGAGC GACTTATGGA GCCCTACCCG TCAATGCTGG AACGGCAACT GGCGCGCATG
CATGAGCACC GCGCCTGA
 
Protein sequence
MNRPTPVKPD NFFLMIYRAL SQRRVPLALR IACTNIFLVA LALVIYACVM GLQFKQAMHE 
QADALGQSLT TQTATSATEL LVSNDILSLN VLLGNLVKNP LVAHAAIYSV DNRILAEAGQ
RPRNSLLGEA EGLYQTKITF QDVTAGQLRI SLDMSQFQQP MLISLQSMGI LAAILLTLAL
ALSLRQGRFI TLPLLQLRVW LRDPQPYTPA TDRQDEIGDI ARQLHARLAP PPPPEPEPEE
DDDEQFDDLH AAAPAPKAAP RAKVALEDED DDEAFAGLLD DDTAPKAAAE VESDEPQYSA
VLAVQLGSQE QLRRLPRTRL AELTERYRDC LEHAASLYDG ETHTLNDGST LVLFHSRECG
EDYLTNAICC GELLRALGHA LQIEVADSGI TLQLQLGLVL GNDLHGLELV DLLMAEKVQD
ALALSQHSRN LLLVERQIND DALIRQRARI RPIASPEGAC CVERLMEPYP SMLERQLARM
HEHRA