Gene PP_4902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4902 
Symbolorn 
ID1041921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5572218 
End bp5572760 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID637148303 
Productoligoribonuclease 
Protein accessionNP_747005 
Protein GI26991580 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC CACAGAACCT GATCTGGATC GACCTGGAAA TGACCGGCCT GGATCCGGAC 
AGCGACGTCA TCATCGAAAT GGCCACCATC GTCACCGACA GCGAGCTCAA TACCTTGGCC
GAAGGGCCGG TGATCGCCAT CCACCACAGT GACGAAGTGC TGGCGCGCAT GGACGAGTGG
AACACCCGCA CCCATGGTGC TTCGGGGCTG ACCCAGCGCG TACGCGAGAG CAAGGTCAGC
ATGGCCGAAG CCGAGGCACA GACCATCGCC TTCCTCGAGC AGTGGGTGCC TAAAGGCAAG
TCGCCGATCT GCGGCAACAG CATCTGCCAG GATCGTCGTT TCCTCTACCG CCACATGCGC
AACCTGGAAA ACTACTTCCA CTACCGCAAC CTGGATGTCT CCACCCTCAA GGAACTGGCC
GCGCGCTGGG CGCCGGACGT GCGTGACAGC TTCAAGAAGG GCAATACCCA CCTGGCGCTG
GACGATATCC GCGAATCGAT CGCCGAACTG CGTCACTATC GCGAGCACTT CATCAAGCTG
TGA
 
Protein sequence
MQNPQNLIWI DLEMTGLDPD SDVIIEMATI VTDSELNTLA EGPVIAIHHS DEVLARMDEW 
NTRTHGASGL TQRVRESKVS MAEAEAQTIA FLEQWVPKGK SPICGNSICQ DRRFLYRHMR
NLENYFHYRN LDVSTLKELA ARWAPDVRDS FKKGNTHLAL DDIRESIAEL RHYREHFIKL