Gene PP_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4899 
Symbol 
ID1046069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5569384 
End bp5570244 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID637148300 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionNP_747002 
Protein GI26991577 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA CCAAACACCC CAGTAATGCC CCACAATTGC TCAGCAGCGT GACGGTTGCC 
CGCCTGCCGG CACGGCAGGC GCATGCCCAC AAAGGCGACT TTGGCCATGT ACTGGTGGTC
GGGGGCGACC TGGGTACCGG AGGCGCTGTG TTGCTCAGTG CCGAAGCCGC CCTGCGTTGC
GGCGCCGGGC TGGTCAGCGT GGCAACCCGG CCCGAGCACG TGTCGGCCAG CCTGGCGCGC
CTGCCCGAGG TCATGTGCCT GGGTGTCCGT TCGGCCAACC AACTGATGGG TGTGCTGGAG
CGCGCCTCGG TCCTGGTGGT CGGGCCCGGC CTGGGGCAGG CGGCGTGGGG CTGTAGCCTG
TTGTCGGCGG TGGCCAACGC CGAGCGGCCG CAAGTGTGGG ATGCCGATGC CTTGAATTTG
CTGGCGCGAA CCCCGCTGGC CCTGCCCAGT GGCAGCATCC TTACTCCGCA CCCGGGGGAG
GCGGCGCGGC TGCTGGGCAT TGCCACTGAG GCCGTACAGG CTGACCGCCC TGGTGCTGCG
CGCAAGCTGG CGCGCCGTTA TAACAGCGTC TGTGTACTCA AAGGTGCCGG CACCCTGGTG
GCAGCCCCGA GCGGGCAGCT GGCGTTGTGC GAGCGCGGGC ACCCAGCGAT GGCCGGCGCC
GGCCTGGGCG ATGTGCTGAC TGGCGTGCTG GCAGCCCTGT TGGCCCAAGG CCTGGATGCC
TGGGGCGCAG CCTGTCTGGG GGTGTGGCTG CACGCCTGTG CCGGCGAGCG CCTTGGGAAA
AAAGGTAGAG GCCTGGCGGC CAGTGATCTG GCGCCGGTCA TTCGTGAGTT GTTGGAGGAG
CATTCTGCGT GTCTGGCTTA A
 
Protein sequence
MPQTKHPSNA PQLLSSVTVA RLPARQAHAH KGDFGHVLVV GGDLGTGGAV LLSAEAALRC 
GAGLVSVATR PEHVSASLAR LPEVMCLGVR SANQLMGVLE RASVLVVGPG LGQAAWGCSL
LSAVANAERP QVWDADALNL LARTPLALPS GSILTPHPGE AARLLGIATE AVQADRPGAA
RKLARRYNSV CVLKGAGTLV AAPSGQLALC ERGHPAMAGA GLGDVLTGVL AALLAQGLDA
WGAACLGVWL HACAGERLGK KGRGLAASDL APVIRELLEE HSACLA