Gene PP_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4897 
Symbol 
ID1046070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5567481 
End bp5568911 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content63% 
IMG OID637148298 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionNP_747000 
Protein GI26991575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.019111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAC GCGCACTGGT CGCCATCGTT GGGCTGCTGC TGACAACGGT GACCGTTGAG 
GCTCTGGCCG TCACTCAAGT CAAGAGCATG CGCCTGTGGC GCGCACCGGA CAACACGCGG
CTGGTCTTCG ACCTGTCTGG CCCCGTGCAG CATAGTGTCT TCACCCTGAG CGCACCCGAT
CGCCTGGTCA TCGACATCAA TGGCGCAACA CTGGCCGCGC CACTGAATGT GGCCACCTCC
AACACGCCGA TAAGCAGTGT ACGTTCGGCT CAGCGTACGC CAACCGACCT TCGGGTTGTG
GTCGACCTGA AAAAGTCGGT TACCCCGAAA AGCTTCACCC TGGCGCCCAA CGCACAATAC
GGCAACCGCT TGGTGGTCGA CCTGTATGAC CAGGAAGCTG ACGCTATCGC GGCCAGCGCG
CCGCCACCTG CACCGGCCCC GGTACAAACG CCTGCGACCA CGCCTGCGGT GCCAGTGACG
CCGGCCCAGC CGGCGATCAA GCTACCACCG GTACCCAGTG GCAAGCGTGA CATCGTGGTT
GCCATCGATG CCGGGCACGG CGGCGAAGAC CCTGGCGCTT CCGGCTCGCG TGGCCAGCAC
GAAAAAGACA TCGTGTTGCA GATCGCCAAG GAACTGCAGC GTCAGATCAA CAGCGAAAAA
GGTTTCCGTG CAGAGCTGAC CCGCACCGGC GATTACTTCA TCCCGCTGCG CAAGCGTACG
GAAATCGCCC GCAAGAAAGG CGCCGACCTG TTCATTTCGA TTCACGCCGA CGCGGCCCCG
TCGCGCGCAG CCTTTGGCGC CTCGGTGTTC GCCCTGTCCG ATCGTGGCGC CACCTCCGAG
ACGGCGCGCT GGCTGGCCGA CACGGAAAAC CGTTCTGACC TGATCGGTGG TGCGGGTAAT
GTCAGCCTCG ACGACAAGGA CCGCATGCTC GCTGGCGTGC TGCTTGATCT GTCGATGACC
GCTACGCTCA GCTCCAGCCT CAACGTGGGG CAAAAGGTAT TGGGCAACAT GGGGCGGGTC
ACTTCGTTGC ACAAGCAGCG CGTGGAACAG GCCGGGTTCA TGGTGCTGAA GTCGCCGGAT
ATTCCGTCGA TCCTCGTTGA AACCGGGTTC ATCTCGAACA ACAACGAAGC AGCCAAGCTG
GCCTCGTCGA GCCACCAGCA AGCGTTGGCC CGTTCGATCC GCACTGGGGT GCACCAGTAC
TTCCAGCAGA ACCCACCACC TGGCACCTAT ATCGCCTGGC TGCGTGACAC CGGCAAGATC
GCCGCCGGCC CGCGTGAACA CACCGTACGC CCTGGCGAAA CCCTGGCGAT GCTCGCCGTG
CGTTACCAGG TCAGTGTGGC CAGTCTGCGC AGCATCAACA GCCTGAAGAC CGATGAGCTG
AAGGTTGGCC AGCGCCTCGA TGTACCCGCC ACAACCTTGG CCGCGCAATG A
 
Protein sequence
MRIRALVAIV GLLLTTVTVE ALAVTQVKSM RLWRAPDNTR LVFDLSGPVQ HSVFTLSAPD 
RLVIDINGAT LAAPLNVATS NTPISSVRSA QRTPTDLRVV VDLKKSVTPK SFTLAPNAQY
GNRLVVDLYD QEADAIAASA PPPAPAPVQT PATTPAVPVT PAQPAIKLPP VPSGKRDIVV
AIDAGHGGED PGASGSRGQH EKDIVLQIAK ELQRQINSEK GFRAELTRTG DYFIPLRKRT
EIARKKGADL FISIHADAAP SRAAFGASVF ALSDRGATSE TARWLADTEN RSDLIGGAGN
VSLDDKDRML AGVLLDLSMT ATLSSSLNVG QKVLGNMGRV TSLHKQRVEQ AGFMVLKSPD
IPSILVETGF ISNNNEAAKL ASSSHQQALA RSIRTGVHQY FQQNPPPGTY IAWLRDTGKI
AAGPREHTVR PGETLAMLAV RYQVSVASLR SINSLKTDEL KVGQRLDVPA TTLAAQ