Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4891 |
Symbol | hflC |
ID | 1041929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5560794 |
End bp | 5561663 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148292 |
Product | HflC protein |
Protein accession | NP_746994 |
Protein GI | 26991569 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.191561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA GATCGCTGAT CGCCCTGATC GCCGCCGTGG TCCTGGCCAT TGTGGCCTGG AACAGCTTCT ACATCGTGTC CCAGACCGAG CGGGCGGTAC TGCTGCGTTT CGGTAAAGTG GTCCAGGCGG ATGTTCAGCC AGGCCTGCAC GTGAAGATTC CGTACGTGAA CCAGGTGCGC AGGTTCGACG CCCGGCTGAT GACACTCGAC GCGCCTACCC AGCGGTTCCT GACCCTGGAA AAGAAAGCGG TGATGGTCGA CGCCTACGCC AAGTGGCGCG TCAAGGACGC TGAACGCTTC TACACCGCCA CGTCCGGCAT GAAGCAGATC GCCGACGAGC GTCTGTCGCG TCGTCTGGAA AGTGGCCTGC GCGACCAGTT CGGTAAACGT ACCCTGCACG AAGTGGTTTC CGGTGAACGT GATGCACTGA TGGCTGACAT CACTGCATCG CTGAATCGCA TGGCGAGCAA GGAACTGGGC ATCGAGGTGG TCGACGTGCG CGTCAAGGCC ATCGACCTGC CGAAGGAAGT CAACCGCAGC GTGTTCGACC GCATGAGCAC CGAGCGTGAG CGTGAAGCCC GCGAGCACCG TGCCAAGGGT AACGAGCTGG CTGAGGGTAT CCGTGCCGAT GCCGACCGTC AGCGCCGTGT GCTGCTGGCC GAGGCTTATC GCGAAGCAGA AGAAACCCGT GGTGATGGCG ATGCCCAAGC GGCCGCTATC TATGCCAAGG CTTACAGCCA GGACGCTGAT TTCTATGCGT TCCACCGTAG CCTGCAGGCA TACCGCGAGA GCTTCTCGAG CAAGAGCGAC GTGATGGTCC TGGACCCGAA GAACGAATTC TTCCGTTACC TGGACAAGAG CAGACCGTGA
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Protein sequence | MSNRSLIALI AAVVLAIVAW NSFYIVSQTE RAVLLRFGKV VQADVQPGLH VKIPYVNQVR RFDARLMTLD APTQRFLTLE KKAVMVDAYA KWRVKDAERF YTATSGMKQI ADERLSRRLE SGLRDQFGKR TLHEVVSGER DALMADITAS LNRMASKELG IEVVDVRVKA IDLPKEVNRS VFDRMSTERE REAREHRAKG NELAEGIRAD ADRQRRVLLA EAYREAEETR GDGDAQAAAI YAKAYSQDAD FYAFHRSLQA YRESFSSKSD VMVLDPKNEF FRYLDKSRP
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