Gene PP_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4881 
Symbol 
ID1044370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5549756 
End bp5550769 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637148283 
Productiron ABC transporter, periplasmic iron-binding protein, putative 
Protein accessionNP_746985 
Protein GI26991560 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GCCCGCAACC GCTGATGCGT ACCCTGGCCG CCGCAGTGCT GAGCCTGGTC 
ATCGGCGCTC CGGCCGCCAT GGCAGACGCA CCGGTCACGC TGACCATGTA CAACGGTCAG
CACAAGGAAA TTGGCGAAGC CATTGCCAAG GCCTATGAGG CCAAGACCGG CATTCACATC
GACATCCGCA AAGGCAGCAG CAACCAGCTG GCCAGCCAGA TCATCGAGGA AGGTGATCGT
TCGCCGGCCG ACATCATCTA CACCGAAGAG TCCCCGCCCC TGAACAACCT GGGCGAGCTG
GGCCTGCTGG CCAAGATTGA CGACGCCACG CTGAACATGA TGCCCAAGGA GTACGTTGGC
GCCAACGGCA CCTGGATGGG TATCACCGCC CGTACGCGCA TCGTGGTGTA CAACCCGAAG
AAAGTCGACG AGAAAGACCT GCCGACCACG GTGATGGACT TCGCCAACCC TGAGTGGGAA
GGGCGCGTCG GCTACGTCCC TACCAGCGGT GCGTTCCAGG AGCAGGCCGT GGCCATTCTG
AAGATGCACG GGCGCGAAGC CACTGAAGAA TGGTTGACCG GCCTGAAAGC CTTCGGCAAG
ACCTACACCA ACAACATGGT CGCCCTCAAA GCTGTGGAAA AAGGTGAAGT GGCTGCAGTA
CTGGTTAACA ACTACTACTG GTACGCACTT GAACGCGAAC GCGGCAAGCT GGACACCAAG
CTCTACTACC TGGCCGACGG CGATGCTGGC AACCTGGTCA CTATCTCCGG CGCAGGCGTG
GTCAAGGCCA GCAAACACCC GAAAGAAGCC CAGGCCCTGC TCAACTGGAT GGCCAGCGAA
GAAGGCCAGC GCGTGATCAC CCAGACCACC GCCGAGTACC CACTGCACAA GGGCATGGTT
TCTGACCGCG GCCTGAAACC GTTCGACGAG CTGCGCCCGC CGAAGATCTC GCCAGCTGAC
CTGGGCAATG CCGAGGAAGC CATCGAACTT GAGCGTGAGG TCGGCCTGCT CTGA
 
Protein sequence
MTIRPQPLMR TLAAAVLSLV IGAPAAMADA PVTLTMYNGQ HKEIGEAIAK AYEAKTGIHI 
DIRKGSSNQL ASQIIEEGDR SPADIIYTEE SPPLNNLGEL GLLAKIDDAT LNMMPKEYVG
ANGTWMGITA RTRIVVYNPK KVDEKDLPTT VMDFANPEWE GRVGYVPTSG AFQEQAVAIL
KMHGREATEE WLTGLKAFGK TYTNNMVALK AVEKGEVAAV LVNNYYWYAL ERERGKLDTK
LYYLADGDAG NLVTISGAGV VKASKHPKEA QALLNWMASE EGQRVITQTT AEYPLHKGMV
SDRGLKPFDE LRPPKISPAD LGNAEEAIEL EREVGLL