Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4877 |
Symbol | rpsF |
ID | 1043837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5544432 |
End bp | 5544857 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148278 |
Product | 30S ribosomal protein S6 |
Protein accession | NP_746982 |
Protein GI | 26991557 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATT ACGAAATCAT CTTCCTGGTT CACCCGGACC AGAGCGAACA AGTCGGCGGC ATGGTTGAGC GTTACACCAA GCTGATCGAA GAAGATGGTG GCAAGATCCA CCGCCTGGAA GACTGGGGCC GTCGTCAACT GGCCTACGCA ATCAACAATG TTCACAAGGC TCACTACGTG ATGCTGAACG TTGAGTGCAC CGGCAAGGCC CTGGCCGAGC TGGAAGACAA CTTCCGCTAC AACGATGCCG TTATCCGTAA CCTGGTCATC CGTCGCGACG AAGCCGTTAC CGGCCAGTCC GAGATGCTGA AGGCTGAAGA GAACCGCAGC GAGCGCCGTG AGCGTCGCGA GCGTCCTGAG CATGCTGACT CCGCCGAAGG CGACGACAGC AATGACAGCG ACTCCAGCGA TAACGCTGAC GAGTAA
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Protein sequence | MRHYEIIFLV HPDQSEQVGG MVERYTKLIE EDGGKIHRLE DWGRRQLAYA INNVHKAHYV MLNVECTGKA LAELEDNFRY NDAVIRNLVI RRDEAVTGQS EMLKAEENRS ERRERRERPE HADSAEGDDS NDSDSSDNAD E
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