Gene PP_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4874 
SymbolrplI 
ID1041941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5542809 
End bp5543255 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID637148275 
Product50S ribosomal protein L9 
Protein accessionNP_746979 
Protein GI26991554 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TCCTGCTGGA AAAAGTCGCT AACCTGGGCA ACCTGGGCGA CAAAGTAAAA 
GTTAAGGCTG GTTACGGCCG TAACTTCCTG CTGCCATTCG GCAAGGCCAC CGTTGCCAAC
GCCGCCAACC TGGCTGCGTT CGAAGAGCGT CGTGCCGAGC TGGAAAAAGC AGCCGCTGAC
AAGAAAGCTT CGGCTGAAAG CCGCGCTGCC CAACTGGCCG AGCTGGAAGT GACCATCACT
GCCACCGCTG GCGACGAAGG CAAGCTGTTC GGTTCGATCG GCACCCACGA CATCGCTGAC
GCCCTGACCG CCTCCGGCGT TGAAGTGGCC AAGGCTGAAG TTCGTCTGCC GAACGGCACC
ATCCGTCAGG TTGGCGAATA CGACGTAGCC GTGCACCTGC ACAGCGACGT TGAAGCCACC
GTACGCGTGG TCGTCGTAGC TGCCTAA
 
Protein sequence
MELILLEKVA NLGNLGDKVK VKAGYGRNFL LPFGKATVAN AANLAAFEER RAELEKAAAD 
KKASAESRAA QLAELEVTIT ATAGDEGKLF GSIGTHDIAD ALTASGVEVA KAEVRLPNGT
IRQVGEYDVA VHLHSDVEAT VRVVVVAA