| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4866 |
|---|
| Symbol | |
|---|
| ID | 1041896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5532266 |
|---|
| End bp | 5533180 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637148267 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | NP_746971 |
|---|
| Protein GI | 26991546 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.445859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000815383 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC
CTGATCGCCA TCGGCTACAC AATGGTCTAT GGCATTATCG GCATGATCAA CTTCGCGCAC
GGCGAGGTGT ACATGATCTC CGCTTACCTC GCGGCGATCA GCCTGGCATT GCTGGCTTAC
TTCGGTGTCG AATCGTTCCC CCTGCTGATG CTGGGCACCT TGTTGTTCAC CATCGTCGTC
ACCGGCGTTT ATGGTTTCAC CATCGAGCGC ATCGCCTACA AACCGCTGCG TAACTCCACC
CGCCTGGCAC CGCTGATCAG TGCCATCGGC ATTTCGCTGA TCCTGCAGAA CTACGCACAG
ATCAGCCAGG GCGCCCGCCA GCAAGGCGTG CCAACCCTGC TGGAAGGCGC CATGCGTGTC
GAAGTCGGGT CCGGCTTCGT GCAACTGACT TATACCAAGA TCTTCATCCT GGTGGCGGCC
TTTGTCGGCA TGGGCCTGCT GACCTACGTG ATCAAGTACA CCAAGCTCGG CCGCATGTGC
CGTGCTACCC AGCAAGACCG CAAGATGGCC TCGATCCTGG GTATCAACAC CGACCGGGTA
ATCTCCTACG TGTTCGTCAT CGGTGCAGTG ATGGCCGCCC TGGCCGGCGT GCTCATCACC
ATGAACTACG GCACCTTCGA CTTCTACGCC GGCTTCATCA TCGGTATCAA GGCGTTCACT
GCCGCAGTGC TCGGGGGTAT CGGCTCGCTG CCGGGTGCCA TGCTCGGCGG GATCATCCTG
GGAATTTCCG AGTCGCTGTT CTCAGGCCTG ATCAACTCCG ACTACAAGGA TGTGTTCAGC
TTCTCGCTGC TGGTGATGAT CCTTATCTTC CGCCCACAAG GCCTGCTGGG TCGCCCGCTC
GTGGCTAAGG TGTGA
|
|---|
| Protein sequence | MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY
FGVESFPLLM LGTLLFTIVV TGVYGFTIER IAYKPLRNST RLAPLISAIG ISLILQNYAQ
ISQGARQQGV PTLLEGAMRV EVGSGFVQLT YTKIFILVAA FVGMGLLTYV IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFVIGAV MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGIIL GISESLFSGL INSDYKDVFS FSLLVMILIF RPQGLLGRPL
VAKV
|
|---|
| |