| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4865 |
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| Symbol | |
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| ID | 1043236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5530962 |
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| End bp | 5532269 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148266 |
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| Product | inner-membrane translocator |
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| Protein accession | NP_746970 |
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| Protein GI | 26991545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.307682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000605126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACATGT CCGTTGCCAA AACTGCCTCT ATTAGCGAAA CCAAGGGTTT CGACCTTAAA
CGCAGCCTGC TGGAGACCAT TGTCGCTGGC CTGCTGGCAC TTATCGTGTT TGGTCCGGTC
GTTGGTGTGG TGCTCGACGG CTACACCTTC AATGCCGAGC CGCGCCGCGT GGCCTGGCTG
GTCGGCGGTG TGATGGTGGG GCGCTTCCTG CTCAGCCTGT TCCTGCAGAC TGCCCCCGGG
CAGCGCATGC TCCTGGGCTT CGACAGCGGT GGCTCGGGCG TGCATGTGAC CGCACCGGAC
TACAAGTCGC GCCTGCGTTA CATCATCCCC GCGCTGATCG TGATTGCCAT CGTTTTCCCG
ATCTTCGCCA ACAAGTACCT GCTGACCGTG GTCATCCTCG GCCTGATCTA CGTATTGCTG
GGCCTTGGCC TGAACATCGT GGTCGGCCTG GCCGGCCTGC TCGACCTGGG TTACGTGGCG
TTCTATGCCA TCGGTGCCTA CGGCCTGGCG CTGGGTTACC AGTACCTGGG GCTGGGCTTC
TGGAGCGTGC TGCCGCTGGC GGCCATCGCT GCGGCGCTGG CGGGGTGCAT CCTCGGCTTC
CCGGTGTTGC GCATGCACGG TGACTACCTG GCGATCGTGA CGCTGGGCTT TGGCGAGATC
ATTCGCCTGG TGCTGAACAA CTGGCTATCG TTCACCGGTG GCCCCAACGG CATGCCGGCA
CCTTCACCCA CCTTCTTCGG CCTTGAGTTC GGCCGCCGGG CCAAGGATGG CGGGGTGCCG
ATCCACGAGT TCTTCGGCTT CGAGTACAAC GCCAGCCTCA AGTTCGTGTT CATCTACGCG
GTGCTGTTCA TGGTCGTGCT GGCAGTGCTG TACATCAAGC ATCGCCTGAC TCGCATGCCG
GTCGGCCGGG CCTGGGAAGC GCTGCGCGAA GACGAGATTG CCTGCCGTTC GATGGGCCTG
AACCACGTGC TGGTCAAGCT GTCGGCCTTT ACCCTGGGCG CCTCGACTGC CGGTCTGGCC
GGGGTGTTCT TCGCCACCTA CCAGGGCTTC GTCAACCCGT CGTCGTTCAC ATTTTTCGAG
TCGGCGCTGA TCCTCGCCAT CGTCGTGCTG GGTGGCATGG GCTCGACCGT GGGTGTGGTC
ATCGCGGCGT TCGTGCTGAC CGTGGCGCCG GAACTGCTGC GCAGCTTCTC CGAGTACCGG
GTGCTGCTGT TCGGCGTGCT GATGGTGCTG ATGATGATCT GGCGACCGCG TGGGCTGATC
CGTATCAGCC GTACCGGTGT GACCCCACGT AAAGGAGTGG CGCCATGA
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| Protein sequence | MNMSVAKTAS ISETKGFDLK RSLLETIVAG LLALIVFGPV VGVVLDGYTF NAEPRRVAWL
VGGVMVGRFL LSLFLQTAPG QRMLLGFDSG GSGVHVTAPD YKSRLRYIIP ALIVIAIVFP
IFANKYLLTV VILGLIYVLL GLGLNIVVGL AGLLDLGYVA FYAIGAYGLA LGYQYLGLGF
WSVLPLAAIA AALAGCILGF PVLRMHGDYL AIVTLGFGEI IRLVLNNWLS FTGGPNGMPA
PSPTFFGLEF GRRAKDGGVP IHEFFGFEYN ASLKFVFIYA VLFMVVLAVL YIKHRLTRMP
VGRAWEALRE DEIACRSMGL NHVLVKLSAF TLGASTAGLA GVFFATYQGF VNPSSFTFFE
SALILAIVVL GGMGSTVGVV IAAFVLTVAP ELLRSFSEYR VLLFGVLMVL MMIWRPRGLI
RISRTGVTPR KGVAP
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