Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4855 |
Symbol | |
ID | 1042822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5521849 |
End bp | 5522190 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148256 |
Product | DNA-binding transcriptional activator OsmE |
Protein accession | NP_746960 |
Protein GI | 26991535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0118747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGC AGACCCTGGC AATCCTTCTG GCAAGCGCCA CCCTGGCCGC CTGCGGCAGC CGCCCGGAAA ACCCGGTGGA TTACGTCACC TACCGCGATG AGCCGCTGGT CAAGCAGGTG GAGAACGGTA TGACCATGCA GAAGGTCATC GCCATTGGCG GCAGCCCGTC GAGCGTGATC GACCTGCCAC ACGGGGGCAC CTGCAACGAC TACATCCTCA ACCACGATGG CAAGCAGCAG CCCTATTACG TGCGCTTCGA TGCCACCGGC CATGTGGATG CCAAAGGCTT CAAGACCTGC AAGCAACGCC AGGAGGACAG CGACGCCCTG CATGGCGCGT AA
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Protein sequence | MYKQTLAILL ASATLAACGS RPENPVDYVT YRDEPLVKQV ENGMTMQKVI AIGGSPSSVI DLPHGGTCND YILNHDGKQQ PYYVRFDATG HVDAKGFKTC KQRQEDSDAL HGA
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