| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4854 |
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| Symbol | lip |
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| ID | 1042639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5520835 |
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| End bp | 5521782 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148255 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | NP_746959 |
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| Protein GI | 26991534 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0143781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGA TGGCCGCTGT AGTGTTGGCC CGTCGTACAC GCAAAGGAGC TGCGGCAATG
CAGCAGGATT TGGCAACGCG ATACCCGCTG GTGCTGGTGC CAGGCATGCT CGGGTTTGTC
CGGATGGTGC TCTACCCCTA CTGGTTCGGC ATTGTGCCGG CCTTGCGCAA GGGCGGGGCG
CAGGTGTTTC CGGTGCAGGT TTCGCCGCTG CATTCCAGCG AGGTACGTGG CGAGCAGTTG
CTGGCGATCA TTGACGACAT CTGCCAACGT ACTGGCGTCG ACAAGGTCAA CCTCATCGGC
CACAGCCAGG GCGCCCTGAG CGCGCGTTAC GCAGCGGCCA AACGGCCGGG GCGGGTGGCA
TCGGTCACGT CGGTGGCGGG GCCCAACCAT GGTTCTGAGC TGGCCGACCA CCTGGAACGC
ACGGCACCGG GCAATTCACC CCAGGGGCGC ATCCTCAAGG CTGTGCTGCA TGGGTTTGCC
GTGCTGCTGG TGTGGCTGGA AACCGGCTGG CGTCGTGACC CGCTGCCGGT AGATGTGCAC
GCCTCGCACC AGTCGCTGAC CAGCGCCGGG GTGGCGCTGT TCAACCAGGC TTATCCACAG
GGCCTGCCGC AAACCTGGGG TGGGGAAGGG GCCTATGAGG TCAATGGCGT ACGCTATTAC
TCCTGGTCCG GCACCTTGCA GCCCGGCCTG ACAGACCAGG GGCGCAACCG CTTCGACGGC
AGCAGCCGCT TCTGCCGCCT GTTCGCACGC AGTTTCATCA AGGAAAAGGG CCATTGCGAC
GGCATGGTCG GGCGTTTCAG TTCGCACCTG GGGCAGGTGA TCGGCGACGA TTACCCGCTC
GATCACCTGG ACATCGTCAA CCAGTCGCTC GGTGCCGTGG GCAAAGGCGC GGAGCCTGTG
CGGCTGTTCA CCGAACATGC AGCCCGGCTC AAGGCGGCGG GGCTTTAG
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| Protein sequence | MVMMAAVVLA RRTRKGAAAM QQDLATRYPL VLVPGMLGFV RMVLYPYWFG IVPALRKGGA
QVFPVQVSPL HSSEVRGEQL LAIIDDICQR TGVDKVNLIG HSQGALSARY AAAKRPGRVA
SVTSVAGPNH GSELADHLER TAPGNSPQGR ILKAVLHGFA VLLVWLETGW RRDPLPVDVH
ASHQSLTSAG VALFNQAYPQ GLPQTWGGEG AYEVNGVRYY SWSGTLQPGL TDQGRNRFDG
SSRFCRLFAR SFIKEKGHCD GMVGRFSSHL GQVIGDDYPL DHLDIVNQSL GAVGKGAEPV
RLFTEHAARL KAAGL
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