Gene PP_4850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4850 
Symbol 
ID1046078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5517510 
End bp5518577 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID637148251 
Producthypothetical protein 
Protein accessionNP_746955 
Protein GI26991530 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0709425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CGCCAAGGCT GGCAGACTGC GGCATTCCCG CTGTCTGCCG TCGAGGCTGT 
ATGACCTTTA CCCCCCGTCA GATCACCCTG GCCAGCCTGA TCATCGTCAT GGCCGGGCTG
CTGCTGGCTT TGCCCCTGAA GTTGCTGCCC AGCCTGCTGG CCGGTCTGCT GGTGTTCGAA
CTGGTCAACA TGCTGACCCC GCGCCTGCAA CCGCTGCTTG CTGGCCAACG CGCGCGCTGG
CTGGCCGTGG CGTTGCTCGG CACGCTGGTG GTCAGCACCC TGACACTGCT GATTGCCGGT
GCCTTCAGCT TCCTGCTGCA CGAGGCGGAA AACCCCGGCG CCTCGCTGGA CAAGTTCATG
GCCTTGGTCG AGCGAGCCCG CAGCCAGTTG CCCCCTTTCA TCGAGGGCTA CCTGCCTGCC
AGTGCCGCAG AGTTCAAGGT GGCCATCGGC GACTGGATCA AGAGCCACCT GAGCGATTTG
CAGCTGGTGG GCAAGGGTAT GGCGCACATG TTCGTGACGA TGCTCATCGG CATGATCCTC
GGTGCCATCA TCGCTTTGCA GCGCATTCCC GATATTTCCC GGCGCAAGCC CCTGGCGGCG
GCGCTGTTCG AACGTCTTAG CCTGCTGGTG AAAGCGTTTC GCAACATCGT GTTCGCGCAA
ATCAAGATCT CGCTGCTCAA CACGATCTTC ACCGGCATTT TCCTGGCCGT GGTGATGCCA
CTGTTCGACG TACACCTGCC GCTGACCAAG ACGCTGATCG TGCTGACCTT CCTGCTGGGC
TTGCTGCCGG TGATCGGCAA CCTGATGTCC AACACCTTGA TCACCATCGT CGGCCTGTCG
CTGTCGATCT GGGTGGCGGC AGCGGCGCTG GGTTACCTGG TCGTCATCCA CAAGATCGAG
TACTTCCTCA ACGCGCGGAT CGTGGGTGGG CAGATCAGTG CCAAGGCGTG GGAATTGCTG
CTGGCGATGC TGGTATTCGA GGCGGCGTTC GGGCTGCCTG GTGTCGTGGC GGGGCCCATC
TACTATGCCT ATCTGAAGAG TGAGCTGAAG CGGGCGGAGC TGGTCTGA
 
Protein sequence
MPAPPRLADC GIPAVCRRGC MTFTPRQITL ASLIIVMAGL LLALPLKLLP SLLAGLLVFE 
LVNMLTPRLQ PLLAGQRARW LAVALLGTLV VSTLTLLIAG AFSFLLHEAE NPGASLDKFM
ALVERARSQL PPFIEGYLPA SAAEFKVAIG DWIKSHLSDL QLVGKGMAHM FVTMLIGMIL
GAIIALQRIP DISRRKPLAA ALFERLSLLV KAFRNIVFAQ IKISLLNTIF TGIFLAVVMP
LFDVHLPLTK TLIVLTFLLG LLPVIGNLMS NTLITIVGLS LSIWVAAAAL GYLVVIHKIE
YFLNARIVGG QISAKAWELL LAMLVFEAAF GLPGVVAGPI YYAYLKSELK RAELV