Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4839 |
Symbol | |
ID | 1043147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5505171 |
End bp | 5506538 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148240 |
Product | hypothetical protein |
Protein accession | NP_746944 |
Protein GI | 26991519 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.387206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.379548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGGAA CACGCGTCTC TTTCTATAAC CTGGCCTGGC GTTGGCATTT TTATGCGGGG CTGTTCGTGG CCCCGTTCAT GATCCTGTTG GCAATCACCG GGATCATCTA CTTGTTCAAG CCCCAGCTCG ACCCGCTGCT GTACCGCGAC CTGATGGTGG TCGAGGCCGG CCAGCACCGG CAGGGCGCAG ACACGATGCT GGCTGAAGTG CGCCAAGCCT ACCCAAAGGG CCACATCGCC CAGTACTTGC CGCCACTGAA CGCCGCGCGC AGTGCGCAGT TCGTGGTGCA TGACGGCGGG CGCGAACTGA ACGTGTTCGT CGACCCATAC AGCGGCAAGG TCCTCGGCGA ACAGGACGGC AAGCAGAACC TGCAGGCCAT CGCCCGCGCC CTGCATGGCG AGCTGATGGT CGGCACGGTC GGTGACCGGC TGGTGGAACT GGCTGCGGGC TGGGGCATCG TGCTGGTGGT ATCGGGCCTG TACCTGTGGT GGCCGCGCGG GCGCAGTGGC GCTGGCGTGC TTTGGCCGCG GCTGTCGGCG CGCGGCCGGC TGTTCTGGCG AGACCTGCAC GCGGTAACCG GTTTCTGGGG TTCGGCCTTG CTGTTGTTGA TGCTGGTCAG CGGCATGACC TGGACCGGCT TGTGGGGCAA GCAGTACGCT GATTTGTGGA ACCGCTTCCC GGCAGCCATG TGGAACGACG TGCCCAAGTC GGACCAGCAG GCGCGTGAGC TGAACAGCGC ACACCGCCAG ACCGTGCCCT GGGCCATGGA AAACACGCCG ATGCCACAGT CCGGTGCACA CGCCGAGCAC GCCGGGCACC ACATGATGTC GGACATGCCC GCAGCGCCCC AGGTGAGCGT GCAGCAAGTC GAAGACATTG CCACTTCGCG TCAGGTCGAG CTGGGCTACA GCATTACCCT GCCCACCACG GCAGACGGCG TGTTCACCAT TGCCGTGTTC GCCGACGACC CGCGCAACGA CGCCACCCTG CATGTCGACC AATACACCGG CAAGGTTCTG GCCGATGTGC GCTGGCACGA CTACAGCCCG GTTGCCCGCG CCACCGAGCT GGGGGTGATG CTGCATGAGG GCAAGATGTT CGGGGCGCTG AACCAGATCA TCATCCTGCT GGTGTGCCTG ATGATTCTGC TGGGTTCGGT GAGCGGGCTG GTGATGTGGT GGAAGCGCCG TCCTGAAGGC GGCCTGGGCG TACCGCCTTT GCGTCATGAC CTGCCACGCT GGAAGGCGGC AGTGGCCGTG ATGCTGGTGC TGGGGGTGAT GTTCCCGCTG GTGGGGGTGT CGATGGTGGT GATGTGGGGG GTGGATAGTT TGGTGGTGAG GCGCCGCCGG GTCTTGGCCA GCGCTTGA
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Protein sequence | MRGTRVSFYN LAWRWHFYAG LFVAPFMILL AITGIIYLFK PQLDPLLYRD LMVVEAGQHR QGADTMLAEV RQAYPKGHIA QYLPPLNAAR SAQFVVHDGG RELNVFVDPY SGKVLGEQDG KQNLQAIARA LHGELMVGTV GDRLVELAAG WGIVLVVSGL YLWWPRGRSG AGVLWPRLSA RGRLFWRDLH AVTGFWGSAL LLLMLVSGMT WTGLWGKQYA DLWNRFPAAM WNDVPKSDQQ ARELNSAHRQ TVPWAMENTP MPQSGAHAEH AGHHMMSDMP AAPQVSVQQV EDIATSRQVE LGYSITLPTT ADGVFTIAVF ADDPRNDATL HVDQYTGKVL ADVRWHDYSP VARATELGVM LHEGKMFGAL NQIIILLVCL MILLGSVSGL VMWWKRRPEG GLGVPPLRHD LPRWKAAVAV MLVLGVMFPL VGVSMVVMWG VDSLVVRRRR VLASA
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