Gene PP_4834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4834 
Symbol 
ID1041846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5500532 
End bp5501386 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID637148235 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionNP_746939 
Protein GI26991514 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.220458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.54169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TCATCGTCGT CGGCGCCATC GCCCTGTTCG TCCTGATCAC CGTGTTCAAG 
GGGGTGCGCA TCGTGCCCCA GGGCGAGGAG TGGATCGTCG AACGCCTGGG TCGCTACCAC
AGCACCCTCA AGCCGGGCCT GAACATTGTC ATCCCCTACA TGGACGTGGT CGCCTACCGC
CTGCCGACCA AGGACATCAT CCTCGATGTG CAGCAGCAGG AAATCATCAC CAAGGACAAC
GCGGTAATCG TCGCCAACGC CCTGTGTTTC GCCAAGGTAG TCGACCCGCA GAAAGCCTCG
TATGGTGTGC AGGACTTCTC GTTCGCCGTC ACCAGCCTGA CCATGACCTC GCTGCGCGCC
ATCGTCGGTG CAATGGACCT CGACGAGGCG CTGTCCAGCC GCGAGCAGAT CAAGGCCCGC
CTGCGCGATG CAATGTCCGA GCAGACCGAA GACTGGGGCG TGACCGTGCG CTCGGTGGAG
ATTCAAGACA TCAAACCCTC GGAAAACATG CAACTGGCCA TGGAACGCCA GGCCGCGGCC
GAACGTGAGC GCAAGGCCGA CGTTACCCGC GCCGAAGGGG CCAAGCAGGC GGCGATCCTC
GAAGCAGAGG CTCGCCTGCA GGCGGCCAGG CTGGATGCCG AGGCACAGAT CAGCCTGGCC
GAGGCCTCGG CGCGCTCGAT TTCGCTGGTG AAGGAAGCGG TGGGCAACGA GACCGTACCG
GCCATGTACC TATTGGGCGA ACGCTATGTG GGCGCGATGG AGAACCTCGC GGGGAGCAGC
AATGCCAAGG TGGTGGTGTT GCCGGCTGAC CTGCAAGAGA CCGTGCGCGG GTTGATGGGC
CGCAACAAGA TTTGA
 
Protein sequence
MTSLIVVGAI ALFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIV IPYMDVVAYR 
LPTKDIILDV QQQEIITKDN AVIVANALCF AKVVDPQKAS YGVQDFSFAV TSLTMTSLRA
IVGAMDLDEA LSSREQIKAR LRDAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA
ERERKADVTR AEGAKQAAIL EAEARLQAAR LDAEAQISLA EASARSISLV KEAVGNETVP
AMYLLGERYV GAMENLAGSS NAKVVVLPAD LQETVRGLMG RNKI