| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4826 |
|---|
| Symbol | cobJ |
|---|
| ID | 1043199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5492315 |
|---|
| End bp | 5494012 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148227 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | NP_746931 |
|---|
| Protein GI | 26991506 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase
[COG2073] Cobalamin biosynthesis protein CbiG |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.595112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGGC TGAACATGCA CAAGGCACCA GCCATCGTCA TTCTCGGCCC GGGCAGCCTG
GCGACGGCGC AGCGTATCCA GGCCTGTTAT CCACAGGCCA CGATCCATGG CCTCGAGGGG
CGTGTCGAGG GTGCGGACCA GTCGTACGCG TCGTTTGGCG ATACCCTTCG CGGGTTGTAC
CAGCAAGACA CGCCGATCAT CGCGTTGTGC GCCGCGGGTA TCGTCATCCG CAGCCTGGCC
AGCCTGCTCA GCGAGAAGGG CAGCGAGCCG CCGGTACTGG CCGTGGCCGA GGATGGTAGC
GCGGTAGTGC CGTTGCTCGG CGGCCTCGGC GGGGTGAACG TGATGGCGCG CGAAATCGCT
GACGCGCTGG GCGTTTCCGC CGCCATCACC ACCAGTGGCG AGCTGCGCTT CGGTACTTGC
CTGCTGAACC CGCCGCAGGG CTATGCATTG GCCGACATCG AGCAAGGCAA GCGCTTTGTA
TCCGACTTGC TGGCGGGTGA GTCTGTGCGC ATCGAAGGTA ACGCCCCGTG GCTGCAGCTG
GCGCAGTTGC CCGCCAGCGA AGCGGCGCAG CGCACCATCC ATGTGGGGCA TCAGGCGCGC
CCGGCCAACC GCGACGAGCT GCTGATCTAC CCGCGCCTGG TGGTGGTGGG CGTTGCAGGT
GGCAATCTGC ACAGTATTCG CGCAGCACTG CAGCAGGCCG GCATCGCCGA GCCCTCGGTA
GCCTGCGTGC TGGCAGACGA GCGAACCATG GCCGACAGCG CGTTGCACGA AGCTGCGCAG
GCCCTGGGTG TCCCTTTGCG CTTCGCCACC TGCCCAGGCG ATGTGGCCAG CATGGTCGCT
GCGGCGGTGC CCGATAGCGA GTTGATAGCG CTTGGAGAAG TCGTGGTCGC GGTGGCGTCT
GCCCCGGTCG ACGTAGCGCA GGTCGGCCGC CGTCGCGGTC GCCTGGCGGT CATCGGCCTT
GGCCCTGGTG CGGCGGAACT GATGGTGCCG GCGGTCAAGG CCGAACTTGC GCAGGCCGAA
GATGTGCTCG GTTACGAAAC TTACGTGCGC ATGGCTGGCC CGTTCCGCGG CGACCAGGTG
CTGCACTGCA CCGACAACCG CGAAGAGATG CAGCGCGCCC GACATGCCTT CGAACTGGCG
GCCCAAGGCC GTTCGGTGGC GGTGGTGTCG TCAGGCGACC CGGGCGTTTT CGCCATGGCC
GCTGCGGTGC TCGAAGCATT GCACGAATCC AGCGACCCCA CCTGGCATCG CGTTGACCTG
CAGATCTTGC CGGGGGTATC CGCCTCGCTG GCAACCGCCG CCCAGGCAGG TGCACCGCTG
GGGCATGACT TCTGCGTGAT GTCGCTGTCG GACAACCTCA AGCCCTGGTC GATCATTGAA
AAGCGCCTGG ACCTGGCTGC CCAGGCCGAC CTGGTGCTGG CCTTCTACAA CCCGATCTCC
AAGGCCAGGC CGCACCAGCT CGGTGTGGCC CTGGAGGTTG TGCGCCGACA TCGTGACGGG
AACACGCCTG TAGTCCTTGG CCGTGACATC GGTAGGCCGG GGCAGACGCT GAAGGTAGTC
ACCTTGGCCG AACTGCTGCC AGAAATGGTC GACATGCGCA CCATGGTGCT GGTTGGATCG
TCCACTACCT GCACTTTCGA CCGCGCAGCT GGCGGGGTTT GGGTCTATAC CCCGCGCTGG
TATGGCGCAA AGCCGTAA
|
|---|
| Protein sequence | MAGLNMHKAP AIVILGPGSL ATAQRIQACY PQATIHGLEG RVEGADQSYA SFGDTLRGLY
QQDTPIIALC AAGIVIRSLA SLLSEKGSEP PVLAVAEDGS AVVPLLGGLG GVNVMAREIA
DALGVSAAIT TSGELRFGTC LLNPPQGYAL ADIEQGKRFV SDLLAGESVR IEGNAPWLQL
AQLPASEAAQ RTIHVGHQAR PANRDELLIY PRLVVVGVAG GNLHSIRAAL QQAGIAEPSV
ACVLADERTM ADSALHEAAQ ALGVPLRFAT CPGDVASMVA AAVPDSELIA LGEVVVAVAS
APVDVAQVGR RRGRLAVIGL GPGAAELMVP AVKAELAQAE DVLGYETYVR MAGPFRGDQV
LHCTDNREEM QRARHAFELA AQGRSVAVVS SGDPGVFAMA AAVLEALHES SDPTWHRVDL
QILPGVSASL ATAAQAGAPL GHDFCVMSLS DNLKPWSIIE KRLDLAAQAD LVLAFYNPIS
KARPHQLGVA LEVVRRHRDG NTPVVLGRDI GRPGQTLKVV TLAELLPEMV DMRTMVLVGS
STTCTFDRAA GGVWVYTPRW YGAKP
|
|---|
| |