Gene PP_4807 details

Gene Information

• Locus tag: PP_4807
• Symbol: mrdA-2
• ID: 1041858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: -
• Start bp: 5470012
• End bp: 5471901
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637148208
• Product: penicillin-binding protein 2
• Protein accession: NP_746912
• Protein GI: 26991487
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0974911
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGCAGC CGATCCGTCT CAAGGACCAC GAGAAAGACG CCCGCCTGGT GCGCAAACGC 
GTCGTGGTCG GCGCAGTCGC GATCATGCTG CTTGTGTGCG TGTTGATCGC ACGGCTGTAC 
TACCTGCAGA TCATCCAGTA CGACTACCAC TCCACGCTGT CGGAGAACAA CCGGGTGCAT 
GTGCAGCCGA TCCCGCCGAC CCGCGGGCTG ATCTTCGACC GCAACGGGGT GATCGTTGCC 
GACAACCGCC CCAGCTTCAG CCTGTCGATG ACCCGCGAAC GTGCGGGTAA CTGGCAGGAA 
GTGCTGGATA CCATCGTCGA AGTGCTGGAC CTCACCGCTG ACGACCGTGC CCTGTTCGAG 
AAGCGCATGC GCCAGGGCCG CCGGCCATTC GAGCCGGTGC CGATCCTGTT CGAGCTCAAC 
GAAGAGCAGA TCGCCCGCGT GGCGGTAAAC CAGTTCCGCC TGCCGGGTGT CGAGGTGGTG 
GCACAGCTGG TGCGGCATTA CCCGCAGGGT GCGCATTTCG CCCATTCGGT GGGTTATGTC 
GGGCGGATCA ACGAGAAAGA GCTGAAAACG CTCGACCCGG TGAACTACAG CGGTACCCAC 
CATATCGGCA AGACCGGCAT CGAGCGCTTC TACGAGGCCG CCCTGCACGG TCAGGTGGGT 
TACGAGGAAG TCGAGACCAA CGCCCGTGGC CGGGTGTTGC GGGTGCTCAA GCGCACCGAT 
CCGAAGCCGG GCAAGGACAT TGTGCTGAGC CTGGACATCA AGCTGCAGGA GGCCGCTGAA 
GCCGCCCTGG GAGGCCGGCG TGGTGCAGTG GTTGCGCTCG ACCCGCGAAC CGGCGAGGTG 
CTGGCGATGG TGAGTCAGCC TAGCTTCGAC CCCAACCTGT TCGTCACCGG CATCAGCTTC 
AAGGCCTATG CCGAGTTGCG CGATTCGATC GATCGGCCGC TGTTCAACCG CGTGCTGCGT 
GGCTTGTACC CGCCGGGGTC GACCATCAAG CCGGCGGTGG CTATTGCCGG TCTGGACAGT 
GGCGTCGTGA ATGCCAGCAG CAGGGTGTTC GACCCTGGCT ACTACCAGCT GCCCAACTAC 
GACCATAAAT ACCGTAACTG GAACCGCTCC GGGGATGGCT GGGTCGACCT GGACACCGCC 
ATCATGCGCT CGAACGACAC CTACTTCTAT GACCTTGCGC ACAAGATGGG CATCGATCGC 
TTGTCCAGCT ACATGAACAA GTTCGGTATC GGCCAGCGGG TTTCCCTCGA CATGTTCGAG 
GAGTCTGCCG GGTTGATGCC GTCGCGCGAA TGGAAGCGTG CCACCCGTCG CCAGGCCTGG 
TTCCCTGGCG AAACCCTGAT TCTCGGCATC GGCCAGGGCT ATATGCAGGC CACGCCGCTG 
CAACTGGCCC AGGCCACTGC ACTGATCGCC AACAAAGGTG TGTGGAACCG CCCGCACCTG 
GCCAAGACCA TCGAAGGCTT GCCGCCGGTA GACGACAACC CCATGGAAGA CATCGTACTG 
CGTGACAAGT CCGACTGGGC CAAGGTCACC CATGGCATGG AACAGGTGAT GCACAACGCC 
CGCGGTACCG CGCGCAAGGC AGCTGCCGGA GCCCAGTACC GCATTGCCGG CAAGAGCGGT 
ACCGCCCAGG TGGTGGCGAT CAAGCAGGGC GAGAAGTACG ATCGCAACAA ACTCCAGGAG 
CGCCACCGCG ACCATGCCCT GTTCGTCGCG TTTGCCCCAG CCGAAGCCCC GAAAATCGTG 
GTTTCGGTGA TGGTCGAGAA CGGTGAGTCC GGCTCGGGTG TCGCCGCTCC GGTGGTACGC 
CAGATCATGG ACGCCTGGCT GCTCGACGAA AATGGCCGGC TCAAACCCGA GTTCGCGCCC 
GCCACCGTTA CCCAGGAATC GGCCCTGTGA 

 

Protein sequence

MSQPIRLKDH EKDARLVRKR VVVGAVAIML LVCVLIARLY YLQIIQYDYH STLSENNRVH 
VQPIPPTRGL IFDRNGVIVA DNRPSFSLSM TRERAGNWQE VLDTIVEVLD LTADDRALFE 
KRMRQGRRPF EPVPILFELN EEQIARVAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYV 
GRINEKELKT LDPVNYSGTH HIGKTGIERF YEAALHGQVG YEEVETNARG RVLRVLKRTD 
PKPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPRTGEV LAMVSQPSFD PNLFVTGISF 
KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDS GVVNASSRVF DPGYYQLPNY 
DHKYRNWNRS GDGWVDLDTA IMRSNDTYFY DLAHKMGIDR LSSYMNKFGI GQRVSLDMFE 
ESAGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALIA NKGVWNRPHL 
AKTIEGLPPV DDNPMEDIVL RDKSDWAKVT HGMEQVMHNA RGTARKAAAG AQYRIAGKSG 
TAQVVAIKQG EKYDRNKLQE RHRDHALFVA FAPAEAPKIV VSVMVENGES GSGVAAPVVR 
QIMDAWLLDE NGRLKPEFAP ATVTQESAL