| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4798 |
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| Symbol | |
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| ID | 1041890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5461059 |
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| End bp | 5462375 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148199 |
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| Product | lytic murein transglycosylase |
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| Protein accession | NP_746903 |
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| Protein GI | 26991478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.287921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTCC GTCTTATCCC CCGCTGGGAA ACCCGCCAGC TGATCGCGGC CTCCAGCTTC
ATCCTGCTCG TGGCCTGTGC GGAAAAGCCC ACCGCCGCCG ACGCGCTGCC GCTGGCCCCT
GCCCAACCCA ATCCCGTGGT GACCGTGCCC GGCGCAACGC CCGACGTCAG CACTGACATC
CAGCCCCTGC AAACCTTCGC CCAATGGCAA GCGGGCTTCC GCGAGCAGGC CCTGCAAGCC
GGCATTTCGC CGAGCACCTT CGACCGCGCC TTCCTCGGTG TCACCCCCGA CCTGGACGTG
ATCAAGGCAG ACCGCAGCCA GCCGGAGTTC ACCCGCCCGG TGTGGGAATA CCTCGAAGGC
GCCCTGTCGC CCCTGCGTGT GCGCAACGGC AAGAAGCTGC TGGAGCAGAA CGCCGAGCTG
CTGACTCGCC TTGAGCAACG CTATGGCGTG GACCGCCAGG TGCTGGTCGC GGTGTGGGGC
ATGGAAAGCA ACTTCGGCCA GTTCCAGGGC AGCAAGTCGG TGATCCGCTC GCTGGCCACT
TTGGCCTATG AGGGCCGCCG CCCACAGTTC GCCCAGGATC AGCTGATTGC CGCGCTGCAG
ATCATCCAGC ATGGTGACAT CCAGCCTGAA GCCATGCGTG GCTCGTGGGC CGGCGCCATG
GGCCAGACCC AGTTCATCCC GACCACCTAC AACACCCATG CCGTGGACTT CGACGGCGAT
GGCCGCCGCG ACATCTGGAA CAGCACACCA GACGCCCTGG CCTCAACAGC GCACTACCTG
CAGAGTTCGG GCTGGAAACG CGGCCAACCG TGGGGCTTCG AGGTACAGGT GCCGGCCGGC
TTCGACTTCT GGCAGGCCGA TGGTGCACTG CGCAAACCGG TGAGTGAATG GCTGGCGATG
GGCGTGAAAC TGCCAGCGGG TACCCAGCTG CCGGCAGGTA GCAACCAGCT GTCTGCCGCC
CTGCTGCTGC CGGCCGGTGC ACGCGGCCCG GCGTTCCTGG TGCTGGACAA CTTCCGCGCC
ATCCTCAAAT ACAACAACTC GTCGTCCTAT GCCCTGGCGG TGAGCCTGCT CGGGGATCGC
TTCAGCGGCT GGGGCTTCAT TGCCGGCAGC TGGCCGAAAG AGGACCTGCC GCTCAGCCGC
ACCGAGCGCA TGGAGTTGCA GAACTTGCTG AACAGCCGCG GGCATGATGC GGGTAATGCC
GATGGCATTA TCGGGGCCAA TACCCGCAAG GCAATCCGCA ATGCCCAGCA AGGGCTGGGA
TGGCCGGCGG ATGGCTACCC GACCCACAAG CTGCTTGAGA GCCTGCGCCA GCAGTAA
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| Protein sequence | MLFRLIPRWE TRQLIAASSF ILLVACAEKP TAADALPLAP AQPNPVVTVP GATPDVSTDI
QPLQTFAQWQ AGFREQALQA GISPSTFDRA FLGVTPDLDV IKADRSQPEF TRPVWEYLEG
ALSPLRVRNG KKLLEQNAEL LTRLEQRYGV DRQVLVAVWG MESNFGQFQG SKSVIRSLAT
LAYEGRRPQF AQDQLIAALQ IIQHGDIQPE AMRGSWAGAM GQTQFIPTTY NTHAVDFDGD
GRRDIWNSTP DALASTAHYL QSSGWKRGQP WGFEVQVPAG FDFWQADGAL RKPVSEWLAM
GVKLPAGTQL PAGSNQLSAA LLLPAGARGP AFLVLDNFRA ILKYNNSSSY ALAVSLLGDR
FSGWGFIAGS WPKEDLPLSR TERMELQNLL NSRGHDAGNA DGIIGANTRK AIRNAQQGLG
WPADGYPTHK LLESLRQQ
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