Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4789 |
Symbol | |
ID | 1042537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5450620 |
End bp | 5451459 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148190 |
Product | CBS domain containing protein |
Protein accession | NP_746894 |
Protein GI | 26991469 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0871051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG ATCGATCGAG CAACGGGCAG AAGTCCTGGC TGGGTAAACT GACCCAGGCT TTTGCCCATG AGCCGAAAAA CCGCCAGGAG CTGCTTGAGC TGCTGCGCGA AGCCCATCAG AACAAATTGC TGGACAGCGA AGCGCTGACC ATCGTCGAAG GCGCCATTCA GGTCGCCGAC CTGCAAGTTC GCGACATCAT GGTGCCGCGT TCGCAGATGA ACAGCATCAA GGCCGGCCAG TCGCCTCGCG AGTTCCTGCC GGCGGTGATC GACGCCGCGC ACTCGCGCTA CCCGGTAATC GGCGAAAGCC ATGACGATGT GCTCGGGATC CTGCTCGCCA AAGACTTGCT GCCGTTGATC CTCAAGGAGA ACGGCGACAG CTTCAACATC AAGGACCTGC TGCGCCCGGC CACCTTCGTG CCCGAGTCCA AGCGCCTGAA CGTGTTGCTG CGTGAATTCC GCGCCAACCA CAACCACATG GCCATCGTCA TCGACGAATA TGGCGGCGTG GCGGGCCTGG TCACCATTGA GGACGTGCTG GAGCAGATCG TCGGCGATAT CGAAGACGAG CACGACGTCG AGGAAGACAG CTACATCAAA CCACTGCCCA GCGGTGATTT CCTGGTCAAA GCGCTTACCC CGATCGAGAA CTTCAACGAG TTCTTCGACA GCGAGTTCTC CGATGACGAG TTCGACACGG TCGGCGGCCT GGTGATGAGC GCCTTTGGCC ACCTGCCCAA GCGCAACGAA ACCACTGAGA TCGGGTCTTA CAAGTTCCGT ATTCTCAACG CCGACAGCCG GCGGATACAC TTGCTGCGCC TGACCCCGAT CACCCGTTAA
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Protein sequence | MSEDRSSNGQ KSWLGKLTQA FAHEPKNRQE LLELLREAHQ NKLLDSEALT IVEGAIQVAD LQVRDIMVPR SQMNSIKAGQ SPREFLPAVI DAAHSRYPVI GESHDDVLGI LLAKDLLPLI LKENGDSFNI KDLLRPATFV PESKRLNVLL REFRANHNHM AIVIDEYGGV AGLVTIEDVL EQIVGDIEDE HDVEEDSYIK PLPSGDFLVK ALTPIENFNE FFDSEFSDDE FDTVGGLVMS AFGHLPKRNE TTEIGSYKFR ILNADSRRIH LLRLTPITR
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