| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4783 |
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| Symbol | thiE |
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| ID | 1042405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5445854 |
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| End bp | 5446477 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637148184 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | NP_746888 |
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| Protein GI | 26991463 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.655377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0379586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTAC GCGGTCTGTA CGCCATCACC GACAGCCAGC TGCTCGCCGG CCGTTTCCTG
TCCCATGTCG AGGCGGCCCT GGAAGGCGGC GTGTGTCTGC TGCAGTACCG CGACAAGACC
GACGATGCTG CGCGCCGCCT GCGTGAAGCC GAAGGGCTGA TGAAGCTCTG CGAGCGTTAC
GGCACCCAGT TGCTGATCAA CGATGACGCC GAACTGGCCG CCCGCCTGGG TGTCGGCGTG
CACCTGGGCC AGACCGACGG CCCGCTGACC CCGGCCCGCG CACTGCTCGG CCGTCAGGCA
ATCATCGGCT CCACCTGCCA CGCCAGCCTC GAACTGGCCG CCCAGGCTGC CAGCGAAGGC
GCCAGCTACG TGGCCTTTGG CCGCTTCTTC AATTCTGTCA CCAAGCCGGG CGCGCCCGCT
GCCAACGTCG GCCTGCTCGA GCAGGCCCGC GCCCAGGTGA AACTGCCGAT CGCCGTGATC
GGTGGCATCA CCCTCGACAA CGCCGCCCCA CTGGTCGCCC ACGGCGCCGA CCTGCTGGCG
GTGATCCACG GCTTGTTCGG TGCCGACAGC GCGCAGGAAG TCACCCGCCG CGCCCGCGCC
TTCAACGCCT TGTTCGCATC CTGA
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| Protein sequence | MKLRGLYAIT DSQLLAGRFL SHVEAALEGG VCLLQYRDKT DDAARRLREA EGLMKLCERY
GTQLLINDDA ELAARLGVGV HLGQTDGPLT PARALLGRQA IIGSTCHASL ELAAQAASEG
ASYVAFGRFF NSVTKPGAPA ANVGLLEQAR AQVKLPIAVI GGITLDNAAP LVAHGADLLA
VIHGLFGADS AQEVTRRARA FNALFAS
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