| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4782 |
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| Symbol | thiD |
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| ID | 1041826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5445043 |
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| End bp | 5445840 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637148183 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | NP_746887 |
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| Protein GI | 26991462 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.291324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0384059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACCT ACAGCTCCCG CCCCGTTGTC CTCTGTCTCT CCGGCCACGA CCCCAGTGGC
GGCGCCGGCT TGCAGGCAGA TATCGAAGCC CTGATCGCCC AAGGCTGCCA CGCTGCACCT
GCAGTGACCG CCCTGACCGT GCAGGATACC GTCAACGTTT CCGACTTCCG CGTGCTCGAC
CGCGAGTGGG TGCTGGCCCA GGCCAATGCC GTGCTGGCCG ACTCCACGGT GGCCGCCGTC
AAGTTGGGCA TGCTCGGCTC GATCGAGATG GTCGACACCG TCGCCGAACT GCTGGCCGCC
CACCCTCACC TGCCGCTGGT CTGCGACCCG GTGCTGCGTG CCGGTGGCGG TGGCCGCCTG
GGCAAGGACG AAGTGGGCTA CGCCCTGCGT GAACGGTTGC TGCCGCTGGC GACCATCGCC
ACGCCGAACC TGCCCGAAGC ACGCATCCTC GCAGAACTGC CCGAGGGCAC CGCTGACGAA
TGTGCCGAGA AACTGTTGCC GTTCTGTAGA CACCTGCTGA TTACCGGCGG TCACGGCGAC
GAAGACGAAA TCCACAACCG CCTGTACACC CAGGACGGCC AGCACTTCAC TTGGACTTGC
CAGCGCCTGC CGGGCAGCTA CCATGGCTCG GGCTGCACCC TGGCCAGCGC CCTGGCCGGC
CGCCTGGCGC TCGGCGAGCA GTTGGAAAGC GCCGTGCGCA CCGCCCTGGA CTACACCTGG
CGCACCCTGC GTGACGCCGA GCAACTGGGC AAGGGCCAAT ACGTGCCGCG CCGCCTGCCC
CTGGACTTCT GCTCCTGA
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| Protein sequence | MNTYSSRPVV LCLSGHDPSG GAGLQADIEA LIAQGCHAAP AVTALTVQDT VNVSDFRVLD
REWVLAQANA VLADSTVAAV KLGMLGSIEM VDTVAELLAA HPHLPLVCDP VLRAGGGGRL
GKDEVGYALR ERLLPLATIA TPNLPEARIL AELPEGTADE CAEKLLPFCR HLLITGGHGD
EDEIHNRLYT QDGQHFTWTC QRLPGSYHGS GCTLASALAG RLALGEQLES AVRTALDYTW
RTLRDAEQLG KGQYVPRRLP LDFCS
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