| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4766 |
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| Symbol | |
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| ID | 1041883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5426769 |
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| End bp | 5428100 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148168 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_746872 |
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| Protein GI | 26991447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.110868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00101931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATTTCG CCAAACTCGG CCTGATCGAA CCGCTGCTGC GCACGCTGCA GCAACTGGAC
TACACCACCC CGACCCCGGT GCAGGCCAAA GCCATCCCCG CCGTGCTGGC CGGCCGCGAC
CTGATGGCCG CAGCCCAGAC CGGTACCGGC AAGACCGCAG GCTTTGCCCT GCCTGTGCTG
CAGCGCCTGG CGCTGGAGGG CGAGAAGGTG GCCAGCAACT CGATCCGCGC CTTGGTGCTG
GTACCCACTC GCGAGCTGGC CGAGCAGGTG CACAACAACG TGCGCGAATA CGCCGAGAAC
CTGCCGCTGA CTACTTACGC GGTGTATGGC GGGGTCAGTA TCAATCCACA GATGATGCGC
CTGCGCCGGG GTGTCGACCT GCTGGTGGCT ACCCCTGGCC GCTTGCTCGA CCTGTTCCGG
CAGAACGCCG TGAAGTTCAA CCAGGTGCAG ACCCTGGTGC TGGATGAAGC CGACCGCATG
CTTGACCTGG GCTTTGCCGA AGAGCTGCAG TCGGTGTACG CGGCACTGCC GCGCAAGCGC
CAGACGCTGC TGTTTTCCGC CACCTTCTCC GATCAGATTC GCATGCTGGC GGGGCTGGCG
CTGAATGACC CCCTCAGTAT CGAAGTGAGC CCGCGCAACG CCACGGCCGC CAGCGTCAAG
CAGTGGCTGG TGCCTGTGGA CAAGAAGCGC AAGGCTGACC TGTTCTGCCA CCTGCTGCGC
AAGCAGCGCT GGAAGCAGGT GCTGGTGTTC GCCAAGACCC GCAATGGCGT CGATCAGCTG
GTGGAGCGCT TGCTGGCCGA AGGCGTGAAT GCCGACGGCA TCCACGGTGA CCGCCCACAG
GCAACCCGCC AGCGTGCGCT GGACAGCTTC AAGGCCCGTG AGGTGCAAGT GCTGGTGGCG
ACCGATGTGG CGGCCCGTGG CCTGGATATC GATGACTTGC CGCTGGTCGT CAACCTCGAC
CTGCCGATCG TTGCCGAAGA CTACGTGCAC CGCATCGGGC GTACCGGGCG GGCGGGCAAC
AAGGGCGAGG CGATTTCGCT GGTGTGTGCG GATGAAGTGC AACTGCTGGC GGCCATTGAA
GTGCTGACCC GGCAGACCCT GCCGCGCCAT GAAGAGCCGG ATTTCATCCC CGAGCACCGG
GTGCCGATGA CCGATGCCAG TGGGCAGGTT ATCAAGAAAC CGAAGAAGCC CAAGAAGCCG
AAAGAAAACA GCGCCAAGCG CGGGCTGGGG CGTTGGATGG ACAGCACTGA AGCGGCCAGT
GCGGAACCGG CGGTGAAGGC TGTACGCAAG GTGCCGAGCT TCAATGGTGG GCCGCGCAAG
CGTAAGCCGT GA
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| Protein sequence | MNFAKLGLIE PLLRTLQQLD YTTPTPVQAK AIPAVLAGRD LMAAAQTGTG KTAGFALPVL
QRLALEGEKV ASNSIRALVL VPTRELAEQV HNNVREYAEN LPLTTYAVYG GVSINPQMMR
LRRGVDLLVA TPGRLLDLFR QNAVKFNQVQ TLVLDEADRM LDLGFAEELQ SVYAALPRKR
QTLLFSATFS DQIRMLAGLA LNDPLSIEVS PRNATAASVK QWLVPVDKKR KADLFCHLLR
KQRWKQVLVF AKTRNGVDQL VERLLAEGVN ADGIHGDRPQ ATRQRALDSF KAREVQVLVA
TDVAARGLDI DDLPLVVNLD LPIVAEDYVH RIGRTGRAGN KGEAISLVCA DEVQLLAAIE
VLTRQTLPRH EEPDFIPEHR VPMTDASGQV IKKPKKPKKP KENSAKRGLG RWMDSTEAAS
AEPAVKAVRK VPSFNGGPRK RKP
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