| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4762 |
|---|
| Symbol | tesB |
|---|
| ID | 1041917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5421848 |
|---|
| End bp | 5422717 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148164 |
|---|
| Product | acyl-CoA thioesterase II |
|---|
| Protein accession | NP_746868 |
|---|
| Protein GI | 26991443 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000102019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000737933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATG TGTTGGACGA CCTGGTCGAC CTGTTGAGCC TCGAATCCAT CGAGGAGAAC
CTGTTCCGTG GACGTAGCCA GGACCTGGGC TTCCGCCAGC TTTACGGTGG CCAAGTGCTG
GGCCAGTCGT TGTCGGCCGC CAGTCAGACA GTCGAGGACG CGCGCCATGT GCATTCGTTG
CACGGCTACT TCCTGCGCCC GGGCGATGCC AGCCTTCCAG TGGTGTACTC GGTAGACCGC
GTGCGCGATG GCGGCAGCTT CAGTACACGG CGGGTGACGG CGATCCAGAA GGGCCAGACC
ATCTTCACCT GCAGCGCGTC GTTCCAGTAC GACGAGGAAG GCTTCGAGCA CCAGGCGCAG
ATGCCTGACG TGGTCGGCCC GGAAAACCTG CCTACCGAAG TCGAACTGGC CCATGCCATG
GCCGACCAGT TGCCCGAGCG CATCCGCGAC AAGGTGCTGT GCGCCAAGCC GATCGAGATC
CGCCCGGTCA CCGAGCGCGA CCCGTTCAAC CCCAAGCCGG GCGACCCGGT GAAGTACGCC
TGGTTCCGCG CCGACGGCAA CCTGCCTGAC GTGCCTGCCC TGCACAAGTA CATGCTGGCC
TACGCCTCGG ACTTCGGCCT GCTGACCACG GCGTTGCTGC CCCATGGCAA ATCGGTGTGG
CAGCGCGACA TGCAGATCGC CAGCCTCGAC CATTCGCTGT GGTTTCACGG CAACCTGCGC
GCCGACCAGT GGCTACTGTA CGCCACCGAT AGCCCCTGGG CCGGCAATTC CCGTGGCTTC
TGCCGCGGCA GCATTTTCAA CCAGGCCGGG CAACTGGTGG CATCGTCGAG CCAGGAAGGC
CTGATTCGCC ATCGCAAGGA CTGGGCATGA
|
|---|
| Protein sequence | MSHVLDDLVD LLSLESIEEN LFRGRSQDLG FRQLYGGQVL GQSLSAASQT VEDARHVHSL
HGYFLRPGDA SLPVVYSVDR VRDGGSFSTR RVTAIQKGQT IFTCSASFQY DEEGFEHQAQ
MPDVVGPENL PTEVELAHAM ADQLPERIRD KVLCAKPIEI RPVTERDPFN PKPGDPVKYA
WFRADGNLPD VPALHKYMLA YASDFGLLTT ALLPHGKSVW QRDMQIASLD HSLWFHGNLR
ADQWLLYATD SPWAGNSRGF CRGSIFNQAG QLVASSSQEG LIRHRKDWA
|
|---|
| |