Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4760 |
Symbol | |
ID | 1043030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5420086 |
End bp | 5421096 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148162 |
Product | alcohol dehydrogenase, zinc-containing |
Protein accession | NP_746866 |
Protein GI | 26991441 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000489958 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00289101 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCAGCA AGGCCATCTA CGTACAACCC GGCGGCGGCT ACGACAAGGT CGAGGTCGGC ACCTGCGAGG CCCAGGCCCC CCAGGCCGGC GAGATTACCG TGCGCCTGCA CGCCAGTTCC CTCAACTACC ACGATTTCGC CGTGGTCAGC GGCATGTGGG GCCCGAGCGA GCGACGCATC CCAATGGCCG ATGGCGCCGG CGAGGTGGTT GCGGTGGGGG CTGGCGTCAC TGAGTTCCAG GTCGGCGACA ATGTGGTCAG CACCTTCTTC CCCGACTGGC TCGATGGCCA GGCCAATGTC GAGGGCTTCG CCAGGGTGCC CGGCGACGGC ATCGATGGCT ACGCCCGTGA GCAAGTGACT GCCCGCGCCA CCGCCTTCAC CCTGGCACCC CAGGGTTTCA GCCATGCCGA GGCTGCCACC CTGACCACCG CCGGCCTTAC CGCCTGGCGC GCGCTGATGA GCGACGATCA CCTCAAGCCC GGCGACACGG TGCTGGTGCA GGGTACCGGC GGTGTGTCGA TTTTCGCCCT GCAGTTCGCC AAGCTGGCGG GCGCGACCGT GATCGCCACC TCGTCCAGCG ATGCCAAGCT GGAGCGCCTG AAGGCCCTGG GTGCCGACCA CCTGATCAAC TACAAGAGCA CCCCGGCCTG GGGTGAGAAG GTGCGCGAGC TGACTGGCAA CCGTGGTGTC GATCATGTGA TTGAAGTGGG CGGCCCGGCG ACGCTGGAGC AGTCGATGAT TGCTGCGCGC ATTGGCGGGC ATGTTTCGCT GATCGGCATC CTTACCGGGG TGGCCGGGCA GTTGCCGCTG GTGCAGGCGC TGGTGCGGCA GATTCGGCTG CAAGGGGTGC TGGTTGGCAG CCGAGCGCAG CAGCAGGCGA TGGTACGGGC GATCGATGCC AACGGCCTGC GGCCGGTGGT GGACAAGCAT TTCGAACTGG AACAGATCGT CGAGGCGTTC CGTTACCAGG AGAGCAACCG GCATTTCGGC AAGATCTGCC TGACCTGGTG A
|
Protein sequence | MSSKAIYVQP GGGYDKVEVG TCEAQAPQAG EITVRLHASS LNYHDFAVVS GMWGPSERRI PMADGAGEVV AVGAGVTEFQ VGDNVVSTFF PDWLDGQANV EGFARVPGDG IDGYAREQVT ARATAFTLAP QGFSHAEAAT LTTAGLTAWR ALMSDDHLKP GDTVLVQGTG GVSIFALQFA KLAGATVIAT SSSDAKLERL KALGADHLIN YKSTPAWGEK VRELTGNRGV DHVIEVGGPA TLEQSMIAAR IGGHVSLIGI LTGVAGQLPL VQALVRQIRL QGVLVGSRAQ QQAMVRAIDA NGLRPVVDKH FELEQIVEAF RYQESNRHFG KICLTW
|
| |