| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4757 |
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| Symbol | |
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| ID | 1043094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5416335 |
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| End bp | 5417681 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148159 |
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| Product | glucarate dehydratase |
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| Protein accession | NP_746863 |
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| Protein GI | 26991438 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00282791 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00286979 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATGC AGACCCTTCA CACCAGCACC CCGGTGGTCA CCGACCTGCG CGTGGTCCCC
GTGGCCGGCC ATGACAGCAT GCTGCTCAAC CTCAGTGGCG CCCATGGTCC GTTCTTCACC
CGCAACGTGG TGGTGCTGCG CGACAGCGCC GGCAATACCG GCCTGGGCGA AGTGCCCGGC
GGCGAGAAGA TTCGCCAGAC CCTGGAGGAC GCCCGCAGCC TGGTGGTCGG CCAGCCGATC
GGCCATTACC AGCGCGTGCT CAATGCCATG CGCCAGACCT TCGCCAACCG CGACTCGGCG
GGTCGCGGCC TGCAGACCTT CGACCTGCGC ATTACCGTAC ATGCGGTAAC GGCCATCGAG
TCGGCGTTGC TCGACCTGCT CGGCCAGCAC CTGAATGTGC CGATGGCAGC ATTGCTGGGC
GAGGGCCAGC AACGCGATGC GGTGAAGATG CTCGGCTATC TGTTCTACAT CGGCGACCGC
CAGCAGACCG ACCTGGCCTA CCGCAACGAA GCCGACAGCG ATGACGACTG GTTTCGCCTG
CGCCACGAAA AGGCCCTGAC CCCGGAAGCA GTGGTGCGGC TGGCCGAGGC CGCCAAGGCG
CGCTATGGCT TCAGCGACTT CAAGCTCAAG GGCGGCGTGC TGCGTGGTGA AGAAGAGATG
GAGGCCGTGA CAGCGCTGGC CGAACGCTTC CCCGAAGCGC GCATCACGCT CGACCCCAAT
GGCGCGTGGT CGCTGAAGGA GGCCATCGCC CTGTGCCGTG ACAAGCACAA TGTGCTGGCC
TACGCCGAAG ACCCCTGCGG CGCCGAGAAC GGTTACTCGG GCCGCGAGGT GATGGCCGAG
TTCCGCCGCG CCACCGGGCT GCCCACCGCG ACCAACATGA TCGCTACCGA CTGGCGACAG
ATGGGCCATG CCATTCAGTT ACAGTCGGTG GACATTCCGC TGGCCGACCC TCACTTCTGG
ACCTTGCAGG GTTCGGTTCG GGTGGCGCAG ATGTGCAACG ACTGGGGGCT GACCTGGGGT
TCTCATTCCA ATAACCACTT CGACATTTCG CTGGCGATGT TCACCCAGGT GGCGGCTGCG
GCGCCGGGTG AAATCACTGC GATCGATACC CACTGGATCT GGCAGGATGG CCAGCGCCTG
ACCCGTGAGC CGCTGCGCAT TGTCGACGGG CATGTGCGAG TGCCGGCGCG GCCGGGTTTG
GGCGTGGAAC TGGATGAAGA TCAGCTGGCC AAGGCCCATG AGTGCTACCG CAACATGGGG
CTGGGTGCGC GGGATGACAG CGTGGCGATG CAGTTCCTGA TTCCGGGTTG GAGCTTCGAT
AACAAACGGC CTTGCCTGGT GCGTTGA
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| Protein sequence | MNMQTLHTST PVVTDLRVVP VAGHDSMLLN LSGAHGPFFT RNVVVLRDSA GNTGLGEVPG
GEKIRQTLED ARSLVVGQPI GHYQRVLNAM RQTFANRDSA GRGLQTFDLR ITVHAVTAIE
SALLDLLGQH LNVPMAALLG EGQQRDAVKM LGYLFYIGDR QQTDLAYRNE ADSDDDWFRL
RHEKALTPEA VVRLAEAAKA RYGFSDFKLK GGVLRGEEEM EAVTALAERF PEARITLDPN
GAWSLKEAIA LCRDKHNVLA YAEDPCGAEN GYSGREVMAE FRRATGLPTA TNMIATDWRQ
MGHAIQLQSV DIPLADPHFW TLQGSVRVAQ MCNDWGLTWG SHSNNHFDIS LAMFTQVAAA
APGEITAIDT HWIWQDGQRL TREPLRIVDG HVRVPARPGL GVELDEDQLA KAHECYRNMG
LGARDDSVAM QFLIPGWSFD NKRPCLVR
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