Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4756 |
Symbol | |
ID | 1041978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5414383 |
End bp | 5415774 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148158 |
Product | amino acid permease |
Protein accession | NP_746862 |
Protein GI | 26991437 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000433889 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00291295 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACCG TGGGATCTGA TGGCAACCTT GCACAAGGTT TCAAGCCACG TCACGTAACG ATGCTGTCCA TCGCCGGCAT CATCGGCGCC GGACTTTTCG TCGGCTCTGG CCATGCCATC GCGGCAGCCG GCCCAGCAAC CATAATTTCC TATTTCGTGG CCGGTACCCT GGTGGTACTG GTCATGCGCA TGCTCGGCGA AATGGCCGTG GCGCACCCCG ACACCGGATC GTTTTCCACC TATGCCGACC AGGCCATTGG CCGCTGGGCC GGCTATACCA TCGGCTGGTT GTACTGGTGG TTCTGGGTAC TGGTCATTCC TATCGAAGCA TTGGCCGCCG GGCATGTGCT GAACGCCTGG TTCCCGCAGG TGGACAGCTG GATCTTCGCC CTGGCTTCGG TGTTGCTGCT GGCCGGTACC AACCTGTTCA GCGTGGCCAA GTACGGCGAG TTCGAGTTCT GGTTTGCCAT CCTCAAGGTC ACCGCCATCC TGGGCTTCAT CGGCCTGGGC TTCGCCGCGC TGATGGACTG GCTGCCCAAC CGCGAGGTCA GTGGGCTGAG CGGGCTGATG GCCGAATACG GCGGTTTTGC GCCGAAAGGC TGGTCGGCAG TGGTGGGTGC GTTCATCACT GTGATGTTCA GCTTCATCGG CACCGAGGCA GTGACCATCG CCGCGTCCGA GTCCAGCGAC CCGTCGCGCA ACATCGCCAA GGCCACCCGC TCGGTGATCT GGCGTATCAG CACCTTCTAC ATCCTGTCGA TCTTCGTGAT CATTTCGGTG GTGCCGTGGA ACGACCCGCA GCTGGCGGTG GTGGGTTCGT ACCAGCGTGC GCTGGAAATC ATGAACATCC CCAACGCCGC GTTCATGGTC GACCTGGTGG TGCTGGTAGC CGTTACCAGC TGCATGAACT CGTCCATCTA CATCGCTTCG CGGATGATGT TTTCGCTGGC CAAGCGCGGT GACGCCCCGG CCTTCCTCAA CAAGACCTCC AAGGTCGGTG TACCGCGTGC TGCAGTGTTC GGTAGCACCC TGATCGGTGC GGCCATCGCA GTCCTCAACT ACTTTGCACC GAAGGGCGTG TTCGAGTTCC TGCTGGCCAG CTCTGGCGCC ATAGCCCTGT TGGTGTACAT GGTTATCGCC ATCTCCCAGC TGCGCATGCG CCGCCGACTG GAGCGCGAGA ACACCGAACT GAAGTTCCGC ATGTGGCTGT TCCCGTACCT GACCTGGGCG GTGATCATCT TCATTGCCGG GGCGCTGGCG GTGATGATGT ACACGCCTGA GCATCGGGCG GAAGTGAGCT CGACATTGGG CCTGGCGATC GTGATTTCCT TCCTGGGGAT CGTGACGTCG AGGGGTCATG CGCAACCGGT GGCAGCGCGA TCGATGGGGT GA
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Protein sequence | MNTVGSDGNL AQGFKPRHVT MLSIAGIIGA GLFVGSGHAI AAAGPATIIS YFVAGTLVVL VMRMLGEMAV AHPDTGSFST YADQAIGRWA GYTIGWLYWW FWVLVIPIEA LAAGHVLNAW FPQVDSWIFA LASVLLLAGT NLFSVAKYGE FEFWFAILKV TAILGFIGLG FAALMDWLPN REVSGLSGLM AEYGGFAPKG WSAVVGAFIT VMFSFIGTEA VTIAASESSD PSRNIAKATR SVIWRISTFY ILSIFVIISV VPWNDPQLAV VGSYQRALEI MNIPNAAFMV DLVVLVAVTS CMNSSIYIAS RMMFSLAKRG DAPAFLNKTS KVGVPRAAVF GSTLIGAAIA VLNYFAPKGV FEFLLASSGA IALLVYMVIA ISQLRMRRRL ERENTELKFR MWLFPYLTWA VIIFIAGALA VMMYTPEHRA EVSSTLGLAI VISFLGIVTS RGHAQPVAAR SMG
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