| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4741 |
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| Symbol | hsdM |
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| ID | 1045919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5395521 |
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| End bp | 5396990 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637148145 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | NP_746849 |
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| Protein GI | 26991424 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00410686 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCATCA GCTCCACCAT CAAGTCCATC CAGGACATCA TGCGCAAAGA CGTCGGCGTC
GATGGCGACG CCCAGCGCAT TGGCCAGCTG GTCTGGCTGC TGTTCCTCAA GATCTTCGAT
GACCGCGAGC TGGAATGGGA ACTGATGGAC GACAACTACA AGTCGCCCAT CCCCGACAGC
TGCCGCTGGC GCACCTGGGC GGCCGACCCG GAAGGCATGA CCGGCGATGC GCTGAAGGAC
TTTATCGACA ACAACCTGTT CCCGCAGCTG CAGAACCTGC ACGAATACAG CAACACACCC
TCGGCCTTTG TGGTGCGCAG CGTGTTTGAA GACGCCTACA ACTACATGAA ATCCGGCCAG
CTGCTGCGCC AGGTGATCAA CAAGATTCAG GAAGGCGTGG ACTTCAACAG GGCCCAGGAA
CGCCACGAGT TCGGCAACCT CTATGAACAA TTGCTGCGCG ACCTGCAGAA CGCCGGCAAC
GCCGGTGAGT TCTACACACC TCGACCAGTC ACCGAATTTA TGGTGCGCAT GGTTGATCCC
AAGCTGGCTG AAAAGGTCAT GGACCCGGCC TGCGGCACCG GCGGCTTTCT CACCTGCGCC
ATCGAGCACA AGCGCAGACG CTATGTAAAA ACCGCCGAAG ACGAACGCAC CTTGCAGGCC
AGCATTTTTG GCGTGGAGAA AAAACCGCTG CCGCACCTGC TGGCCACCAC CAACATGATC
CTGCATGGCA TCGAAGTGCC CAGCCAGATC CGTCACGACA ACACCCTGAG CAAACCGCTG
ATCAGCTGGG GCCCAAGCGA GCGCGTGCAT TGTATCGTCG CCAACCCGCC GTTCGGCGGC
ATGGAAGAAG ACGGTATCGA AACAAATTTT CCTGCCGCTT TCCGCACCCG GGAAACCGCC
GATTTGTTCT TGGTATTGAT TATGCAGCTG CTCAAAGATG GTGGCCGCGC CGCAGTGGTA
CTGCCCGATG GCTTCCTTTT TGGCGAAGGC ATCAAAAGCC GCATCAAGGA AAAGCTGCTC
ACCGAGTGTA ACCTGCACAC CATCGTTCGC TTGCCCAATG GCGTGTTCAA CCCCTACACC
GGCATCAAGA CCAACCTGCT GTTCTTCACC AAAGGCACAC CGACCAAACA GGTGTGGTTC
TACGAGCACC AATACCCGGC AGGCGTTAAA AACTACTCGA AAACCCGCCC CATGCGCATC
GAAGAGTTTG CCGTGGAAGA AGCCTGGTGG GGCAGCGAGG CCGATGGCTT TGCTGCTCGC
GCGGAGAACG CATTTGCCTG GCAAGTCAGC GTCGAAGAGC TGCAAGCGCG CAACTGGAAC
CTGGACTGCA AAAACCCGCA TACCGGCGAG CAGGTCAGCC ACGACCCGGA CGAACTACTG
CGCAACTACG CCAGCGTGCA AGACGAAATC AGCGATCTAC GCGATCAGCT TAAAGCGGTA
TTGGCCGAAG CCCTGAGGCG CAAGGTATGA
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| Protein sequence | MSISSTIKSI QDIMRKDVGV DGDAQRIGQL VWLLFLKIFD DRELEWELMD DNYKSPIPDS
CRWRTWAADP EGMTGDALKD FIDNNLFPQL QNLHEYSNTP SAFVVRSVFE DAYNYMKSGQ
LLRQVINKIQ EGVDFNRAQE RHEFGNLYEQ LLRDLQNAGN AGEFYTPRPV TEFMVRMVDP
KLAEKVMDPA CGTGGFLTCA IEHKRRRYVK TAEDERTLQA SIFGVEKKPL PHLLATTNMI
LHGIEVPSQI RHDNTLSKPL ISWGPSERVH CIVANPPFGG MEEDGIETNF PAAFRTRETA
DLFLVLIMQL LKDGGRAAVV LPDGFLFGEG IKSRIKEKLL TECNLHTIVR LPNGVFNPYT
GIKTNLLFFT KGTPTKQVWF YEHQYPAGVK NYSKTRPMRI EEFAVEEAWW GSEADGFAAR
AENAFAWQVS VEELQARNWN LDCKNPHTGE QVSHDPDELL RNYASVQDEI SDLRDQLKAV
LAEALRRKV
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