| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4737 |
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| Symbol | |
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| ID | 1042275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5386489 |
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| End bp | 5389299 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148141 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | NP_746845 |
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| Protein GI | 26991420 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0148478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC CCGCCGCGTT CCTGCGTGAT GCCGAGCGCC TGATCCCCGC CGAACGCCGC
TTCGACGACC CCACCTCCAC CCTGGCCTTC GGCACCGACG CCAGCTTCTA CCGCTTGATC
CCCAAGCTGG TGGTGCGCGT CGAGTCCGAG GACGAAGTGG TCGGCCTGAT CAAACTGGCC
CAGCGCGAGC GGGTGCCGGT CACCTTCCGC GCTGCCGGCA CCAGCCTGTC TGGCCAGGCC
ATCAGCGACT CGGTGCTGAT CGTGCTCGGC GATAACTGGA ACGGCCGCGA AATTCGTCGC
CAGGGCGAGC AGATTCGCCT GCAACCCGGC GTGATCGGCG CCCAGGCCAA CGCCTGGCTG
GCCCCCTTCG GGCGCAAGAT CGGCCCCGAC CCGGCCTCGA TCAACGCCTG CAAGATCGGC
GGCATCGTCG CCAACAACGC CAGTGGCATG TGCTGCGGCA CCGCGCAGAA CACCTACCAC
ACCCTGGCGG GCCTGCGCCT GGTGCTGGCC GACGGCACCC GCCTGGACAG CGAAGACCCG
GCCAGCGTCG CCGCCTTCGA AAGCAGCCAC GCCGAGCTGC TGGAAGCACT GGCCCGCCTG
GGCCGCGAAA CCCGCGCCAA CACCGCGCTG GCCGAGCGCA TCCGGCACAA ATACCGGCTG
AAGAACACCA CGGGCCTGTC ACTGAACGCA CTGGTGGACT ACGACCAGCC GCTGGACATC
CTGCAGCACC TGCTGGTCGG CTCCGAAGGC ACGCTGGGCT TCATCAGCGC CGTCACGTAC
GACACCGTGC CCGACCACCC GCACAAGGCC AGCGCCCTGC TGGTGTTCCC CAGCGTTGAA
AGCTGCTGCC GCGCGGTACC CGTGCTCAAG CAGCAGCCGG TCTCGGCCGT AGAACTGCTC
GACCGCCGCA GCCTGCGCTC GGTGCAGAAC ATGCCCGGCA TGCCGCTGTG GGTAAAAGGC
CTGTCGGACA ATGCCTGCGC CCTGCTGATC GAATCCCGCG CCGCCAGCCA GAGCCTGCTG
CACGAGCAAC TGCAGCAGAT CATGGCCTCG ATCGCCGACT TCCCCCTGGA ACAGCAGGTG
GACTTCAGCG AAGACCCGGC CGTGTACAAC CAGCTGTGGA AAATCCGCAA GGACACCTTC
CCCGCCGTCG GCGCTGTGCG CCAGACCGGC ACCACGGTCA TCATCGAAGA CGTGACCTTC
CCCGTCGAGC AACTGGCCGA AGGCGTCAAC CGCCTGATCC AGCTGTTCGA CAAGCATCAC
TATGACGAAG CGATCATTTT CGGCCATGCG CTGGAAGGCA ACCTGCACTT CGTCTTTACC
CAGGGGTTCA ACAGCGCCGA AGAAGTCGCC CGTTACCAGG CGTTCATGGA CGACGTGGCG
CAGCTGGTGG CGGTGGAGTT TGGCGGCTCG CTCAAGGCCG AGCACGGCAC CGGGCGCAAC
ATGGCGCCCT TCGTGGAGCT GGAGTGGGGG CACGACGCCT ACCAGCTGAT GTGGAAGCTC
AAGCGCCTGC TCGACCCCAA CGGCATCCTC AACCCCGACG TGGTGTTGAG CGAAGACCCG
GATATCCACC TGAAAAACCT CAAGCCGCTG CCTGCCGCCG ACAAAATCGT CGACAAGTGC
ATCGAGTGCG GCTTCTGCGA ACCGGTGTGC CCGTCCAAGG GCCTGACCCT CAGCCCGCGC
CAGCGCATCG TCATGTGGCG TGACATCCAG GCCAAGCAAC GCGCTGGCAT CGATACCCGT
GAACTGATGC AAAGCTACCA GTACCAGGGC ATCGACACCT GCGCCGCTAC CGGCCTGTGC
GCCCAGCGCT GCCCGGTCGG CATCAACACC GGCGAGCTGG TGAAGAAACT GCGCAGCCAG
GCCGCCGACC ACGCTAAAAC CGCCGATTGG CTGGCCGAGC ATTTCCACAC TGCCCTAAGC
GGTGCGCGCC TGACCCTGAC CGCCGCCAAC ACCGCACGCA AGCTGCTAGG CGCCCCGCGC
CTGGGCCGCC TGAGCGCCTC GCTGAGCAAA GCCAGCAAAG GCCGCCTGCC CCAATGGACC
CCGGCCATGC CGCAACCGCT TCGCCCGCTG GCCTTCGGCG CCACCAGCAA CGACGCCCGC
CCCCGCGTGG TGTACCTGGC CGCCTGCGTT TCCCGGGTAA TGGGCCCGGC CTATGCCGAC
CGCGAGCAAA GCTCGCTGCT GGACAAAACC CGCGCCCTGC TGGAAAAGGC CGGTTACCAG
GTGGTGTTCC CCGACAACGC CGACAGCCTG TGCTGCGGCC AACCGTTCGC CTCCAAGGGC
TACCCCGAGC AGGCCGAACA CAAACGCCAG GAGCTGATCA CCGCCCTGCT GCACGCCAGC
CGCGGCGGCC TCGACCCGAT CTATTGCGAC ACAAGCCCCT GCACCCTGCG CCTGGTGCAG
GACCTGAGCG ACACCCGGCT GGACCTGTAC GACCCCGTGC GCTTCATCCG CACCCACCTG
CTCGACCGAC TGGAGTTCAC CCCCCAGGAC GAACCGGTAG CTGTGCACGT GACCTGCAGC
ACCCAGCACC TGGGCGAAAG CCAGGCCTTG ATCGACCTGG CGCGGCGTTG CAGCAAACAG
GTGGTGATCC CGGAAGGTAT TCATTGCTGC GGGTTTGCCG GTGACAAAGG CTTTACCACC
CCCGAGCTGA ACGCCCACTC GTTGCGCAGC CTGAAGGACG CCGTGCAGTA TTGCAGCGAA
GGTATTTCCA CCAGCCGCAC CTGCGAGATA GGCCTGTCGA GCCACAGCGG CATCGACTAC
CACGGCCTGG TCTACCTGGT AGACCGCGTC ACCCGGCCAC GCAGCCTCTA A
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| Protein sequence | MSLPAAFLRD AERLIPAERR FDDPTSTLAF GTDASFYRLI PKLVVRVESE DEVVGLIKLA
QRERVPVTFR AAGTSLSGQA ISDSVLIVLG DNWNGREIRR QGEQIRLQPG VIGAQANAWL
APFGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGLRLVLA DGTRLDSEDP
ASVAAFESSH AELLEALARL GRETRANTAL AERIRHKYRL KNTTGLSLNA LVDYDQPLDI
LQHLLVGSEG TLGFISAVTY DTVPDHPHKA SALLVFPSVE SCCRAVPVLK QQPVSAVELL
DRRSLRSVQN MPGMPLWVKG LSDNACALLI ESRAASQSLL HEQLQQIMAS IADFPLEQQV
DFSEDPAVYN QLWKIRKDTF PAVGAVRQTG TTVIIEDVTF PVEQLAEGVN RLIQLFDKHH
YDEAIIFGHA LEGNLHFVFT QGFNSAEEVA RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN
MAPFVELEWG HDAYQLMWKL KRLLDPNGIL NPDVVLSEDP DIHLKNLKPL PAADKIVDKC
IECGFCEPVC PSKGLTLSPR QRIVMWRDIQ AKQRAGIDTR ELMQSYQYQG IDTCAATGLC
AQRCPVGINT GELVKKLRSQ AADHAKTADW LAEHFHTALS GARLTLTAAN TARKLLGAPR
LGRLSASLSK ASKGRLPQWT PAMPQPLRPL AFGATSNDAR PRVVYLAACV SRVMGPAYAD
REQSSLLDKT RALLEKAGYQ VVFPDNADSL CCGQPFASKG YPEQAEHKRQ ELITALLHAS
RGGLDPIYCD TSPCTLRLVQ DLSDTRLDLY DPVRFIRTHL LDRLEFTPQD EPVAVHVTCS
TQHLGESQAL IDLARRCSKQ VVIPEGIHCC GFAGDKGFTT PELNAHSLRS LKDAVQYCSE
GISTSRTCEI GLSSHSGIDY HGLVYLVDRV TRPRSL
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