| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4736 |
|---|
| Symbol | lldD |
|---|
| ID | 1043044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5385268 |
|---|
| End bp | 5386413 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148140 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | NP_746844 |
|---|
| Protein GI | 26991419 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000909372 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTT CTGCCTCTAC CGACTATCGC GCCGCGGCCC AACGCAAGCT GCCCCCCTTC
CTGTTCCACT ACGCTGACGG CGGCGCCTAC GCCGAGCACA CCCTGCGCCA CAACGTCTCG
GACCTGGCCG GCATCGCCCT GCGCCAGCGC GTGCTGAACA ACATGTCCGA GCTCAGCCTG
GAAACCAAGC TGTTCGACGA AACCCTGAGC ATGCCGGTGG CCTTGGCCCC GGTCGGCCTC
ACCGGCATGT ACGCCCGCCG TGGCGAAGTG CAGGCCGCAC GCGCAGCGGC GGCCCATGGC
ATCCCGTTCA CCATGTCGAC TGTGTCGGTG TGCCCGATCG AAGAAGTGGC ACCCGCCATC
AACCGGCCGA TGTGGTTCCA GCTGTATGTA CTCAAGGACC GCGGCTTCAT GCGCAATGCC
CTGGAGCGCG CCAAGGCCGC CGGCGTCAAG ACCCTGGTGT TCACCGTGGA CATGCCCGTA
CCCGGTGCCC GCTACCGCGA CGCCCACTCT GGCATGAGCG GCAAGAACGG CCCGCTGCGC
CGCGTGCTGC AAGCCATGAC CCACCCCGAG TGGGCATGGG ATGTGGGCGT GATGGGCCGC
CCGCATGACT TGGGCAACAT CTCCAAATAC CGTGGCAACC CCACCGGCCT TGCCGACTAC
ATCGGCTGGC TGGGCAACAA CTTCGACCCG TCCATTTCCT GGAAAGACCT GGAGTGGATC
CGCGAGTTCT GGGACGGCCC GATGATCATC AAGGGCATTC TCGATGCCGA TGACGCCCGC
GATGCGGTCA AGTTCGGTGC CGACGGTATC GTGGTGTCCA ACCACGGCGG CCGCCAGCTC
GACGGCGTGC TGTCCAGCGC CCGTGCCCTG CCGGCCATTG CCGACGCGGT CAAAGGCGAC
CTGAAGATTC TGGCCGACTC GGGCATTCGC AGCGGCCTGG ACGTGGTGCG CATGATCGCC
CTGGGTGCCG ACACCGTACT GATCGGCCGC GCCTTCCTTT ACGCCCTTGC CGTGCATGGC
CAGGCCGGCG TGAAAAACCT GCTTGAGCTG TTCGAAAAGG AAATGCGCGT GGCCATGGTG
CTGACCGGTG CCAAGTCGAT CAGCGAGATC ACCCGCGACT CGCTGGTACG CGAACTGGGC
GCCTGA
|
|---|
| Protein sequence | MIISASTDYR AAAQRKLPPF LFHYADGGAY AEHTLRHNVS DLAGIALRQR VLNNMSELSL
ETKLFDETLS MPVALAPVGL TGMYARRGEV QAARAAAAHG IPFTMSTVSV CPIEEVAPAI
NRPMWFQLYV LKDRGFMRNA LERAKAAGVK TLVFTVDMPV PGARYRDAHS GMSGKNGPLR
RVLQAMTHPE WAWDVGVMGR PHDLGNISKY RGNPTGLADY IGWLGNNFDP SISWKDLEWI
REFWDGPMII KGILDADDAR DAVKFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGD
LKILADSGIR SGLDVVRMIA LGADTVLIGR AFLYALAVHG QAGVKNLLEL FEKEMRVAMV
LTGAKSISEI TRDSLVRELG A
|
|---|
| |