Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4732 |
Symbol | |
ID | 1045268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5381298 |
End bp | 5381846 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148136 |
Product | cyclase/dehydrase |
Protein accession | NP_746840 |
Protein GI | 26991415 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.22786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0214019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCTTGA GCCACTGGAA TGAATACCGG ACAATACAAA CCCTGTCATA CGCACAGAAC CTGTTTTCGG CACGCTGCGA AGCGCCGCCA CCCAGCCTTG GAAGTGACGC CTGGATGACT ACCCATATTC AACGCTCCGC CCTGCTGCCA TACCCCGCCC AGGCGCTTTA CGATCTGGTC AATGATGTGG CCAGCTACCC TGAGTTTTTG CCGTGGTGCT CGGCCTCGAC GGTGATCGAA ACCAGCGATA CACACATGCG TGCCAAGCTC GAAGTGGCCA AGGGTGGCAT GAGCCAGCAC TTCGTGACGC GTAACGTGCT GGTGCCGGGG CAGTCCATCG AAATGAACCT CGAAGAAGGG CCGTTCACCC AGCTGCATGG TGTTTGGGTG TTCAAGCCGC TGGGTGAAAA AGCCTGCAAG ATCAGCCTGG ACCTGTCCTT CGATTACGCC GGGCCGATTG TGCGCGCCAC GTTGGGCCCG CTATTCAATC AGGCGGCGAA TACGCTGGTC GATGCGTTCT GCCAGCGTGC CAAGCAATTG AATGCCTGA
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Protein sequence | MCLSHWNEYR TIQTLSYAQN LFSARCEAPP PSLGSDAWMT THIQRSALLP YPAQALYDLV NDVASYPEFL PWCSASTVIE TSDTHMRAKL EVAKGGMSQH FVTRNVLVPG QSIEMNLEEG PFTQLHGVWV FKPLGEKACK ISLDLSFDYA GPIVRATLGP LFNQAANTLV DAFCQRAKQL NA
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