| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4725 |
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| Symbol | dapB |
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| ID | 1043973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5373494 |
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| End bp | 5374297 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148129 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | NP_746833 |
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| Protein GI | 26991408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.111929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00253408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGACGTA TTGCAGTGAT GGGCGCGGCG GGGCGGATGG GCAAAACCCT CATCGAAGCC
GTGCAACAAA CCCCGGGCGC GGGGCTGACT GCGGCGATCG ATCGCCCTGA CAGCTCGTTG
GTCGGGGCTG ATGCCGGAGA GCTGGCGGCA CTTGGCCGAA TTGGCGTGCT GTTGTCCGAC
GACCTGGCCA AGGTTGCCGA CGAGTTCGAT GTACTGATCG ACTTCACTCA TCCCTCGGTG
ACCCTGAAAA ACCTCGCGTT CTGCCGCAAG CACGGCAAGG CGATGATCAT CGGCACGACC
GGTTTTACAG TCGAAGAGAA GCAGTTGTTG GCTGAGGCTG GCAAGGACAT TCCAATCGTG
TTCGCCGCCA ACTTCAGCGT GGGGGTCAAC CTTAGCCTCA AGCTGCTGGA TATGGCTGCG
CGGGTGCTGG GCGATGATGT CGATATCGAA ATCATCGAGG CGCACCACCG GCACAAGGTC
GATGCGCCGT CGGGTACTGC ACTGCGCATG GGTGAAGTGG TTGCCAATGC GCTGGGCCGT
GATCTGCAGG AAGTGGCCGT GTATGGCCGT GAAGGGCAAA CCGGCGCGCG TGATCGCAAA
ACCATCGGTT TCGCTACCGT GCGTGCCGGC GATGTGGTGG GCGATCACAC CGTGTTGTTC
GCTGCCGAAG GCGAGCGCCT GGAAATCACC CACAAGGCCT CCAGCCGCAT GACTTTCGCC
AAGGGTGCCG TGCGTGCGGC GCTGTGGCTG GACGGGCGCG AGCCGGGGCT GTACGACATG
CAGGATGTGC TTGAGCTGCG TTAA
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| Protein sequence | MRRIAVMGAA GRMGKTLIEA VQQTPGAGLT AAIDRPDSSL VGADAGELAA LGRIGVLLSD
DLAKVADEFD VLIDFTHPSV TLKNLAFCRK HGKAMIIGTT GFTVEEKQLL AEAGKDIPIV
FAANFSVGVN LSLKLLDMAA RVLGDDVDIE IIEAHHRHKV DAPSGTALRM GEVVANALGR
DLQEVAVYGR EGQTGARDRK TIGFATVRAG DVVGDHTVLF AAEGERLEIT HKASSRMTFA
KGAVRAALWL DGREPGLYDM QDVLELR
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