Gene PP_4718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4718 
SymbolftsH 
ID1045877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5364640 
End bp5366553 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content61% 
IMG OID637148122 
ProductATP-dependent metalloprotease FtsH 
Protein accessionNP_746826 
Protein GI26991401 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.518421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0121069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGACA TGGCAAAGAA TCTGATCCTG TGGTTGATCA TCGCAGCTGT CCTGGTGACA 
GTGATGAACA ACTTCTCCAG CCCTAACGAG CCGCAGACCC TCAACTACTC CGACTTCATC
CAGCAGGTCA AGGATGGCAA GGTCGAGCGT GTGACCGTCG ATGGCTACAT CATTACTGGC
AAGCGCACCG ATGGCGACAA CTTCAAGACT GTGCGCCCGG CCATCACCGA CAATGGCCTG
ATCGGCGATC TGGTCGACAA CCACGTGGTC GTCGAAGGCA AGCAGCCTGA GCAACAGAGC
ATCTGGACGC AGTTGCTGGT GGCGAGCTTC CCGATCCTGG TGATCATTGC CGTGTTCATG
TTCTTCATGC GCCAGATGCA AGGTGGCGCG GGCGGCAAGG GCGGGCCGAT GAGCTTCGGC
AAGAGCAAGG CGCGCCTGCT GTCCGAAGAC CAGGTCAAGA CCACGCTGGC TGACGTTGCG
GGCTGCGACG AGGCCAAGGA AGAGGTTGGC GAGCTGGTCG AGTTCCTGCG CGATCCGGGC
AAGTTCCAGC GCCTGGGTGG CCGTATCCCG CGCGGTGTGC TGATGGTCGG CCCACCCGGT
ACCGGTAAGA CCCTGCTGGC CAAGGCCATC GCGGGCGAAG CGAAAGTACC GTTCTTCACC
ATTTCCGGTT CGGACTTCGT GGAAATGTTC GTGGGTGTCG GTGCCAGCCG TGTGCGCGAC
ATGTTCGAGC AGGCCAAGAA GCACGCCCCG TGCATCATCT TCATCGACGA AATCGACGCC
GTTGGTCGCC ATCGTGGCGC CGGCATGGGC GGCGGTCACG ACGAGCGTGA GCAAACCCTC
AACCAGTTGC TGGTGGAGAT GGACGGCTTC GAGATGAATG ATGGCATCAT CGTCATCGCC
GCCACCAACC GTCCGGATGT GCTCGACCCT GCGCTGCTGC GCCCCGGCCG CTTCGACCGC
CAGGTGGTGG TTGGCCTGCC GGACATCCGT GGTCGCGAGC AGATCCTCAA GGTGCACATG
CGCAAGGTGC CGATTGGCGA GAACGTCAAC CCGGCGGTCA TCGCGCGTGG TACCCCAGGC
TTCTCCGGCG CCGACCTGGC CAACCTGGTC AACGAGGCTT CGCTGTTTGC CGCGCGTTCC
AACAAGCGCC TGGTCGAAAT GAAAGAGTTC GAGCTGGCCA AGGACAAGAT CATGATGGGC
GCCGAGCGCA AGACCATGGT CATGTCCGAA AAGGAAAAGA GAAACACTGC CTATCACGAG
GCTGGCCACG CCATTGTCGG TCGCCTGGTG CCTGAGCACG ACCCGGTCTA CAAGGTTTCG
ATCATCCCGC GTGGTCGTGC CTTGGGTGTG ACCATGTTCC TGCCGGAAGA AGACCGCTAC
AGCCTCTCCA AGCGTGCGCT GATCAGCCAG ATCTGCTCGC TGTATGGCGG CCGTATCGCC
GAGGAGATGA CCTTGGGCTT CGATGGCGTG ACCACTGGCG CGTCCAACGA CATCATGCGC
GCCAGCCAGC TCGCTCGTAA CATGGTGACC AAATGGGGCC TGTCCGAGAA GCTCGGCCCG
CTGATGTATG CAGAGGAAGA GGGCGAGGTG TTCCTCGGCC GCAGTGCCGG TAGCCAGCAT
GCCAGCGTGT CCGGCGAGAC TGCCAAATTG ATCGACTCCG AGGTGCGCAG CATCATCGAT
CAGTGCTACG CCACTGCCAA GCAGTTGCTG ATCGACAACC GCGACAAGCT CGAGGCGATG
ACCGAAGCGC TGATGAAGTA CGAGACCATC GATGCCGATC AGATTGACGA CATCATGGCT
GGGCGCACAC CACGTGAGCC ACGTGATTGG GACGATGACA AGCACTCGGG CACGCCTGCG
GCCCAGGATG AGCGTCCGGA ATCGCCAATC GGCGGCCCAG CGGCTGAACA CTAA
 
Protein sequence
MNDMAKNLIL WLIIAAVLVT VMNNFSSPNE PQTLNYSDFI QQVKDGKVER VTVDGYIITG 
KRTDGDNFKT VRPAITDNGL IGDLVDNHVV VEGKQPEQQS IWTQLLVASF PILVIIAVFM
FFMRQMQGGA GGKGGPMSFG KSKARLLSED QVKTTLADVA GCDEAKEEVG ELVEFLRDPG
KFQRLGGRIP RGVLMVGPPG TGKTLLAKAI AGEAKVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKHAP CIIFIDEIDA VGRHRGAGMG GGHDEREQTL NQLLVEMDGF EMNDGIIVIA
ATNRPDVLDP ALLRPGRFDR QVVVGLPDIR GREQILKVHM RKVPIGENVN PAVIARGTPG
FSGADLANLV NEASLFAARS NKRLVEMKEF ELAKDKIMMG AERKTMVMSE KEKRNTAYHE
AGHAIVGRLV PEHDPVYKVS IIPRGRALGV TMFLPEEDRY SLSKRALISQ ICSLYGGRIA
EEMTLGFDGV TTGASNDIMR ASQLARNMVT KWGLSEKLGP LMYAEEEGEV FLGRSAGSQH
ASVSGETAKL IDSEVRSIID QCYATAKQLL IDNRDKLEAM TEALMKYETI DADQIDDIMA
GRTPREPRDW DDDKHSGTPA AQDERPESPI GGPAAEH