Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4718 |
Symbol | ftsH |
ID | 1045877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5364640 |
End bp | 5366553 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148122 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | NP_746826 |
Protein GI | 26991401 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.518421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0121069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGACA TGGCAAAGAA TCTGATCCTG TGGTTGATCA TCGCAGCTGT CCTGGTGACA GTGATGAACA ACTTCTCCAG CCCTAACGAG CCGCAGACCC TCAACTACTC CGACTTCATC CAGCAGGTCA AGGATGGCAA GGTCGAGCGT GTGACCGTCG ATGGCTACAT CATTACTGGC AAGCGCACCG ATGGCGACAA CTTCAAGACT GTGCGCCCGG CCATCACCGA CAATGGCCTG ATCGGCGATC TGGTCGACAA CCACGTGGTC GTCGAAGGCA AGCAGCCTGA GCAACAGAGC ATCTGGACGC AGTTGCTGGT GGCGAGCTTC CCGATCCTGG TGATCATTGC CGTGTTCATG TTCTTCATGC GCCAGATGCA AGGTGGCGCG GGCGGCAAGG GCGGGCCGAT GAGCTTCGGC AAGAGCAAGG CGCGCCTGCT GTCCGAAGAC CAGGTCAAGA CCACGCTGGC TGACGTTGCG GGCTGCGACG AGGCCAAGGA AGAGGTTGGC GAGCTGGTCG AGTTCCTGCG CGATCCGGGC AAGTTCCAGC GCCTGGGTGG CCGTATCCCG CGCGGTGTGC TGATGGTCGG CCCACCCGGT ACCGGTAAGA CCCTGCTGGC CAAGGCCATC GCGGGCGAAG CGAAAGTACC GTTCTTCACC ATTTCCGGTT CGGACTTCGT GGAAATGTTC GTGGGTGTCG GTGCCAGCCG TGTGCGCGAC ATGTTCGAGC AGGCCAAGAA GCACGCCCCG TGCATCATCT TCATCGACGA AATCGACGCC GTTGGTCGCC ATCGTGGCGC CGGCATGGGC GGCGGTCACG ACGAGCGTGA GCAAACCCTC AACCAGTTGC TGGTGGAGAT GGACGGCTTC GAGATGAATG ATGGCATCAT CGTCATCGCC GCCACCAACC GTCCGGATGT GCTCGACCCT GCGCTGCTGC GCCCCGGCCG CTTCGACCGC CAGGTGGTGG TTGGCCTGCC GGACATCCGT GGTCGCGAGC AGATCCTCAA GGTGCACATG CGCAAGGTGC CGATTGGCGA GAACGTCAAC CCGGCGGTCA TCGCGCGTGG TACCCCAGGC TTCTCCGGCG CCGACCTGGC CAACCTGGTC AACGAGGCTT CGCTGTTTGC CGCGCGTTCC AACAAGCGCC TGGTCGAAAT GAAAGAGTTC GAGCTGGCCA AGGACAAGAT CATGATGGGC GCCGAGCGCA AGACCATGGT CATGTCCGAA AAGGAAAAGA GAAACACTGC CTATCACGAG GCTGGCCACG CCATTGTCGG TCGCCTGGTG CCTGAGCACG ACCCGGTCTA CAAGGTTTCG ATCATCCCGC GTGGTCGTGC CTTGGGTGTG ACCATGTTCC TGCCGGAAGA AGACCGCTAC AGCCTCTCCA AGCGTGCGCT GATCAGCCAG ATCTGCTCGC TGTATGGCGG CCGTATCGCC GAGGAGATGA CCTTGGGCTT CGATGGCGTG ACCACTGGCG CGTCCAACGA CATCATGCGC GCCAGCCAGC TCGCTCGTAA CATGGTGACC AAATGGGGCC TGTCCGAGAA GCTCGGCCCG CTGATGTATG CAGAGGAAGA GGGCGAGGTG TTCCTCGGCC GCAGTGCCGG TAGCCAGCAT GCCAGCGTGT CCGGCGAGAC TGCCAAATTG ATCGACTCCG AGGTGCGCAG CATCATCGAT CAGTGCTACG CCACTGCCAA GCAGTTGCTG ATCGACAACC GCGACAAGCT CGAGGCGATG ACCGAAGCGC TGATGAAGTA CGAGACCATC GATGCCGATC AGATTGACGA CATCATGGCT GGGCGCACAC CACGTGAGCC ACGTGATTGG GACGATGACA AGCACTCGGG CACGCCTGCG GCCCAGGATG AGCGTCCGGA ATCGCCAATC GGCGGCCCAG CGGCTGAACA CTAA
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Protein sequence | MNDMAKNLIL WLIIAAVLVT VMNNFSSPNE PQTLNYSDFI QQVKDGKVER VTVDGYIITG KRTDGDNFKT VRPAITDNGL IGDLVDNHVV VEGKQPEQQS IWTQLLVASF PILVIIAVFM FFMRQMQGGA GGKGGPMSFG KSKARLLSED QVKTTLADVA GCDEAKEEVG ELVEFLRDPG KFQRLGGRIP RGVLMVGPPG TGKTLLAKAI AGEAKVPFFT ISGSDFVEMF VGVGASRVRD MFEQAKKHAP CIIFIDEIDA VGRHRGAGMG GGHDEREQTL NQLLVEMDGF EMNDGIIVIA ATNRPDVLDP ALLRPGRFDR QVVVGLPDIR GREQILKVHM RKVPIGENVN PAVIARGTPG FSGADLANLV NEASLFAARS NKRLVEMKEF ELAKDKIMMG AERKTMVMSE KEKRNTAYHE AGHAIVGRLV PEHDPVYKVS IIPRGRALGV TMFLPEEDRY SLSKRALISQ ICSLYGGRIA EEMTLGFDGV TTGASNDIMR ASQLARNMVT KWGLSEKLGP LMYAEEEGEV FLGRSAGSQH ASVSGETAKL IDSEVRSIID QCYATAKQLL IDNRDKLEAM TEALMKYETI DADQIDDIMA GRTPREPRDW DDDKHSGTPA AQDERPESPI GGPAAEH
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