| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4711 |
|---|
| Symbol | rbfA |
|---|
| ID | 1043934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5355703 |
|---|
| End bp | 5356101 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637148113 |
|---|
| Product | ribosome-binding factor A |
|---|
| Protein accession | NP_746819 |
|---|
| Protein GI | 26991394 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0858] Ribosome-binding factor A |
|---|
| TIGRFAM ID | [TIGR00082] ribosome-binding factor A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.165962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00698134 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAG AATATAGCCG TACCCAACGT ATTGGCGATC AGATGCAGCG CGAGCTGGCC
GAGCTGATCC GTCGCGAAGT CAAGGATCCG CGTGTCGGTC TGGTGACTAT CACCGCCGTG
GACGTGAGCC GTGACCTGGG CCATGCCAAG GTGTTCATCA CCGTCATGGG CGAGGAAACC
CCGGATGCCG TGCAGCAGTC GCTCAAGGCA TTGAATAGCG CCGCCAGCTT CCTGCGTCTG
CACCTGGGGC GTTCGATGCA ACTGCGCAGC GTGCCGCAGC TGCACTTCCA TTTCGATGAA
AGTGTCAGCC GTGGTGTGCA CCTGTCGGCG CTGATCGAGC GTGCAGTGGC CGAAGACCGC
CTGCACAAGG ATGCCGACGA GTCGGACACC AAGGAGTAA
|
|---|
| Protein sequence | MAKEYSRTQR IGDQMQRELA ELIRREVKDP RVGLVTITAV DVSRDLGHAK VFITVMGEET
PDAVQQSLKA LNSAASFLRL HLGRSMQLRS VPQLHFHFDE SVSRGVHLSA LIERAVAEDR
LHKDADESDT KE
|
|---|
| |